Microarray Probes on PGSC0003DMT400049446
Probe ID | Chip | Probe Sequence |
---|
CUST_20077_PI426222305 |
JHI_St_60k_v1 |
TTTTCCAGAGTATTGAAGCTGAATGTCTCGTGTGTGAAAAATGAAGTTGATCTTCTGGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049446
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049446 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G03450.1 |
+3 |
1e-31 |
97 |
49/88 (56%) |
RGA-like 2 | chr3:819636-821279 REVERSE LENGTH=547 |
Transcript Sequence (1807 bp)
>PGSC0003DMT400049446 1807 pgsc_dm_v3.4
AACCTCACTTATATTAAGGAAGCACGAAGGTAACTCCAGCAATTTACCCAAAAAAAAAAA
AAAAAAGATGAGTTCAGGAGAGATGTCCATGGATACAATTATGGAAGATGAAGATTCCTT
TGTTTCTGAAACAGATGCAATCATCTACGCTGCTTCTGATATCTCAGGGTGGACTCACAG
TTTGATCTCAGATAACAATATTCCTAATTCGTCCTCTTCTACCAGTGTAGACGACTGCCA
GCAACAGATATCGACTGCTGGTGATGGTGATGATTCGATGATTGTATCATCAAGTGCATC
TTCCAGCTGGTTTAATAATAATAAGCAAATTCATGATCATCAAGAGATTAGGATATTTAA
TGTTGATTTCAGGGCATTTTGCAACAACAGACTGAAATCTCGCGGTGGATCTGAATTTCG
TAGCGGTTTATTGCTGGGTAGGACAGTGAAAGAAGAGACCAGCGTTAGACTTGTCAATAC
GTTAATGGCTTGTGCCGAGGCGATCCAAGAGAACAACCTAAGCCTAGCGGATGTACTAAT
CAGTGACATAAAAAGACTTAGAGCCCGTTTGGAATGGCTTAAACAAAAGTAGCTTTGAAT
AACGTGTGGTCCATACTTTAGCTGATCTTCAAGCATCGATGTTGAATATTAGACCCAGTA
ATGTGGAAGCAGTGGCTGTGAACTCTGTTTTCCATTCCAGGAGCAATTGAGAAAGTGTTG
GATTTAATAAAACAAATAGAGCCGAAGATTGTGGTCATGGCCAAACAAGAAGCGAATCAC
AATGGGAGTGACTTTATGAACAGAACTAACGAAGCATGGCATTCAACAATGTTCGATTTG
TTGGAGAACTCAGAGTGGACACTAAGCGCAACACTCTAGGCTTGGAGATTGCGGGGCAGT
ACCTAGGGCGGGAAATCTATAACTTGGTGGCTTGCGAAGGGACTGAGCGAGTTGTGAGAC
ACGAGACGCTGTGTCAATGGCTAGTGAGATTCCACTCTACGGGGTTCAACCTGGTTTCCC
TGAGTTCAAATACGCACAGACATGCAAACTTGCTATTGGCCTTAAACACAAATGAAGAAG
GATATAGAGTAGAAGTGAAAGATGGGTGTCTTATGTTGAGTTGGCATAGTCGCCCGCTCA
TCACCACCTCTGCTTGGCGGCTATGTGGCCAAGTTTAGGGAGTCAGTCAATGGGTGTGGT
TGATCTGCAACTGTCCTGCATCATCCAATACGTAGTTTTATATGTTACTCTTCTTTTCTT
CGACCTCACTGTTATTGAGAGGATCTCTGCAGTAGCCATTAAATTTGATAACGCAAAGGG
CACAATCTTTTGAAAACAGTCTCTTTAACTCCACGAGATAAGGGTAAGGTTTGCGTACAC
CCTGCCCTCTGCTTATGGGACTACATTAGATTTGCTGTTGTTGTTGTTGTTGAGGGTAGC
ACCTGGATGTTCCTCCCTAGTGTCATATTCAGAACTTGTAATATAATTGTCTGTGCTGTA
ACACTATTTTCTGTATAAATGTTTTGTCTTTAGATCACTCATGTCATCTGCAACACCTTC
TCTGTTTACAATTGTCTACATTTTTTCTAGGCTTGAATAACAAATTAATTGTAATTCCCA
AAGGAAAAACTAGGAGATAAACACTAGATGTTATTGGGCTTCATCATAGTTACTGTTCTG
TAAATTAGGTATTGCCATCTGTGTAAGATGAGGGACTTCTTGTCTCTGCATCATTCATTA
TGTTTATTTTTCCAGAGTATTGAAGCTGAATGTCTCGTGTGTGAAAAATGAAGTTGATCT
TCTGGAG