Microarray Probes on PGSC0003DMT400049142
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52392_PI426222305 |
JHI_St_60k_v1 |
AAGAAAAAGTATGCACCTATTTGTGTCACAATGCCAACTGCTAGAATATGTCACAAGTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049142
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049142 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G51400.1 |
+1 |
4e-15 |
67 |
47/116 (41%) |
Photosystem II 5 kD protein | chr1:19052172-19052492 REVERSE LENGTH=106 |
Transcript Sequence (348 bp)
>PGSC0003DMT400049142 348 pgsc_dm_v3.4
ATGGCTTCTTTACTAATGTCATCTTCATTTCTAGTCCATATCGGAGAATTCAACTACCAA
AGAACCAGGAACGAAGGGTTTTCCCCCCTCTCCGCGCATTCAAATAGGAGAAGAGTGCTA
AAAGTTAATGCCTTTAATAAGGATGAAAAAATTGTGACAAAAAAAGAGGAAAAAAAGAGC
AATGGATCAAGAAGGGAATGGGCTTTTGCCATAATGGCAATAGTAGCAACAAGTTCATTT
GCAAGTGTTGTTATAGCTGAGGAACCAAAGGCAAGGACACTTAAGGCAAAGAAAAAGTAT
GCACCTATTTGTGTCACAATGCCAACTGCTAGAATATGTCACAAGTGA
