Microarray Probes on PGSC0003DMT400049095
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52482_PI426222305 |
JHI_St_60k_v1 |
GCCAGTTAGCATCACAATCTGTATTGTCTTGTGTATATGTGTAATCTATAGGTTATGGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049095
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049095 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G47240.1 |
+2 |
1e-68 |
232 |
130/201 (65%) |
nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369 |
Transcript Sequence (2123 bp)
>PGSC0003DMT400049095 2123 pgsc_dm_v3.4
GAGTGATAACATTATCCCTTAGCAAATGCTTATTTTTAGTCGGGAAAATTATGGAGAATA
GCAAACATTTAGCCTATATTAGGTAATATCTTATGATCTCTGAGCAAGGAAGCATGAACT
CGAAGTAGAACAATCGATAATAAGGCAATACAAAATGCATCATTAGCTTATAAAGAATGA
TGTCCTGTTTCTAATGCAGTCAATAAGAAGAATATTATCTATCAATCTACAAGTTATTAG
ATAACGCCACTAATGCTACTAAATGAGAAACGTTGCTGTTTGTATCTCAAAATGAAGTTC
GAATTTTTGTAAATTTTCTGTTTTAACTTCAGGGCTGTTAACAAAGGCTTCTTATTCAAG
CACTTCTTATGATGCTACAAGATCAGTTAGCAAGAATAATTTCTTAGAGGACACTTTCTC
TTATAAGATAAACGGTACAAACCATACAAGTTTGTATTTTCGAGATAAATGGGTGCTTGA
TGCCTCTGACGATGAATATGGAGGAGTACTCGTCAACGCAGAAAGACTACCATCTGATCC
CGACAAATTTACCTTTGTGCTTCGTGCATCTCTCTCTCATTGGAAAGTGAAGGGGAAGAA
GGGAGTTTGGCTTAAGCTACCACTAGAAAAATGTGATCTAGTTCCTGTTGCAGTAAAGGA
AGGATTTCAATACCATCATGCAGAAAGAGGATATGTTATGATGACTTATTGGATTCCGGA
GGAACCCTGTATGCTTCCTTCGAATGCATCACATCAAGTTGGAGTTGGGGGTTTTGTGAT
CAACGATAAAAATGAGGTGCTTGTCGTGCAAGAGAAACATTTTACGCCGTCTCTTTCAGG
CCTATGGAAAATACCAACTGGTTTTATTCATGAGTCCGAGGAGATCTTTACAGGAATTGT
GAGAGAAGTGCAGGAGGAAACTGGCATTGATACTGAATTTGTGGAGGTTATGGCTTTCAG
GTAACACAATTCTTCCTCTTCAAAGAACCATGAGTTTATCATAACGGACAGCCATATATA
ATACAACCTTTTTATCGATAGGAAGAGCTGTATTAGAACTCTTATAAGAACATGAAATGC
TGATACCATAAGTATCCGAACAACTTGGCTCAGACACAGAATGTGGAGTTGCTATTCCCT
AGATTTCACTGTCTCCTTTAGGATATTTCAAGCTTTATTCAGCTTCTTGCTCTAACTCAT
GCTATGTACATTAGTTTTGGACTCTAATTGTTGATTTTACAGTTACAAACAAGATACCAT
TGTTTAAATTAACATTTATCGATGTCCTTCTTCAGGCATGTTCACGATGTGGCCTTTCAA
AAGTCAGATTTGTTCTTCGTTTGTCTGTTAAGACCCCTGTCAAAACAGATCATGGTTGAT
GATCTAGAAATTCAGGATGCTAAGGTAAGCATATCGTATTGTGTAATACTCACCTGATGA
GCTAGCGTTTGAGATTGAGTTAGACTCAATGTCCATTTTTCTTAACATTATACCACATCC
AAACTCGTCCTTATTCTTGTGTGTCTCAGTGTTGGTTCCGCATGTCATATTGTCCACACA
TCAGCTGTTTAGTCTAGGAACACACACCACCATATTGGTCAGAAAAATGTTGTTTCCTTA
TATATTTTTGGACAATCGTTATCTCATGAGCTAGCTTTTAAGGTTGAGTTAGACTTAAAG
TTTGTAGCTTTATGCAACTTAGCATTTACTCGAGCTGTCTTTTCTTTTTTCAATGCAGTG
GATGCCTCTAGTTGAGTTTGTGGAGCAACCTCTAATCCAAGAAGACGATATGTTCAAGAA
AATAATTGACATTTTTATCGCTAGACTAGGGAAGCGGTATTGCGGATTGTCTGTCCATCA
ATTGGTTTCCAAATTTGATGACAAACTTTCTACATTGTACTTTAACACAGTTGATGACCC
AAATTTGAACTGTCAAGCCAGTTAGCATCACAATCTGTATTGTCTTGTGTATATGTGTAA
TCTATAGGTTATGGATTCTGTAAATATACTTAAAAGTTATTCAAAAGTACTTGTTACAGG
GAGGTAACTGTCATATGATTTTCTTTTTTTATAATTTGTATATTAGGTTTCTGTATCGGG
TGTTTGCACCAAACCAAAAAATG
