Microarray Probes on PGSC0003DMT400048535
Probe ID | Chip | Probe Sequence |
---|
CUST_35288_PI426222305 |
JHI_St_60k_v1 |
CAATGTACTCAATAGTAGTGGCACCTATTAGTTTCCCATTCATAAAAAGTGGCTAAATTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048535
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048535 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G61520.1 |
+1 |
0.0 |
563 |
291/484 (60%) |
Major facilitator superfamily protein | chr5:24739358-24741175 REVERSE LENGTH=514 |
Transcript Sequence (1837 bp)
>PGSC0003DMT400048535 1837 pgsc_dm_v3.4
TACATAAGTCAGACCTTACAATTCATACTTGCAAATTTCACTCTACACAGTTTAATTTGA
GCTTGTAGAGAAGAAATGGCAGTTGGTATTGTCCCAACAAGTGAGGGTTCCGCGGATTAC
AATGGAAGGATTACGTGGTTTGTGGTGTTATCATCCATCGTTGCTGCAACCGGAGGAATC
ATCTTTGGTTATGATATCGGAATTTCAGGAGGAGTGATCTCTATGGCGCCGTTTCTGAAG
AAATTCTTCCCAGAAGTGTTCACTAAGATGACACATGTAGCTGAAATAAGCAACTACTGT
GTATTTGACAGCCAACTACTGACCTCTTTCACTTCCTCTTTATACATTGCTGGTCTTATT
GCTTCCTTCTTGGCCTCACCAGTCACTCGTACATATGGCCGTAAACCAACAATTATAATC
GGTGGAATAGCATTTCTCATCGGTTCTGCCCTTGGAGGCGCAGCATCCAATATCTACATG
TTATTACTTGGTCGAATCCTGCTAGGTGTAGGTGTTGGTTTTGCAAATCAGGCAGTCCCT
TTATACCTTTCAGAAATGGCACCTGCTAAGTACAGGGGATCTTTCAATATCGCGTTCCAA
TTATGTGTAGGAATTGGAGTACTATTTGCTAGCCTTCTTAACTACGGTGTTCTAAAGATT
AAAGGTGGTTGGGGATGGAGAATTTCCTTAGCGATGGCTGCAGCTCCTGCTACATTTCTA
ACAATAGGAGCATTTTTTCTCCCAGAAACCGCAAACAGCCTAATTCAACATGGAAATGAT
CATCAAAAAGCTAAGAAGATTCTACAACGTGTACGTGGTACAACCGATGTGCAAGCAGAA
CTAGACGATCTCATCAAAGCAAGTGACAAGTCAAAAGCCGTCAAGCATCCTTTTAAGCAA
ATCATTAAACGGAAATACAGGCCACAACTTGTTATGTCAATATTAATACCATTCTTCCAA
CAGGTGACTGGGATCAACGTGATCTCCTTCTACGCTCCAATTCTGTTTCAAACAATAGGC
CTAGGTGCGAGTGCATCACTTATGTCTGCTGTGGTGACAGGTGTGGTAGGCACCAGCGCG
ACTTTCTTAGCATTGTTGATAGTTGACAGGGTCGGGCGAAGGGCTATGTTCAGTTTTGGG
GGAATCCAAATGTTTGTATCACAAATGTTGATAGGGATAATAATGGCAGTTAAGTTAGGA
GATCATGGGGTGTTGAGCAAGGGGTATGGGCTATTGGTTTTGGTGTTGATATGCATTTAT
GTTGCAGGTTTTAGTTTGTCATGGGGTCCATTAGGATGGTTAGTTCCAAGTGAAATATTT
CCATTAGAAATAAGGTCAGCAGGACAAAGCATAACAGTGGCTGTGGGGTTAATATTCACT
TTTATAATTGCTCAGACTTTCTTGGCTATGCTCTGCCATCTAAAATCAGGGATTTTCTTC
TTCTTTGGGGCATGGGTTGCAATCATGACTGTATTTGTCTACTTTTTCTTGCCAGAGACA
AGGAATTTGCCAATTGAAAATATGGAAAGCATATGGAGGGATCATTGGTTTTGGAAGAGA
TTTGTTTTTTATCAGCAAGACTATGACAAGGGTGACACTACTTAAAAAGCTATTGCCACT
CATTTGCTTCTCAAGCAATTCCAATATACTACTATAAGTTAAACATATTTCCTGTTGGAT
ATGAATTGTAATTTGAAAAAGATTTACAGTTCAATACCCTCCATCTAGGGGAATTATAGT
TGATTTTTTATGGTCTTTTTGTCAATGTACTCAATAGTAGTGGCACCTATTAGTTTCCCA
TTCATAAAAAGTGGCTAAATTGATATTTATGCAAAAC