Microarray Probes on PGSC0003DMT400048394
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40338_PI426222305 |
JHI_St_60k_v1 |
TTGTTATGGTGGCATTGATTGCTCTTTATTTTCCTCCAATTGTTCTGCTAATGTTGAAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048394
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048394 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G34040.1 |
+3 |
4e-94 |
305 |
148/283 (52%) |
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:12374433-12376179 FORWARD LENGTH=457 |
Transcript Sequence (2419 bp)
>PGSC0003DMT400048394 2419 pgsc_dm_v3.4
CAAACGGATACAATAATATAAGCGCTGATACATTAATCTAATGCGCGAGATACATTAATC
GTTAAGTAAGATACATTACATTTTATACATGATACACTAAACTGATGTGTGAGATACACT
AATCTGATGCGCGAAAATGAATTTTTTTAGAAATTTGTAAACTTATAAGAAATAATGATA
ATAAGTAAACTAAAATGTGAGAGTTACTTAATTTTTCCTTTTATGAATGCCTTAGAAGGC
CAAAGTTTTCAACATAAAGAAACACCTGAGAGGCCCAGACAGCCCATCAGGTTATACAAT
AAAATACTCACTTTAGCTCTTTCCATTTCTCTGCCCTCCTCGTTTCCTTCTCTCTGTCCG
CCGCCTTTGGCTCTTCATCTGTGGGTAATCAACATTCTTCATGACCATCATGTTGTGTAT
TGCAAATCTAGGTGCTCCTTTCCCACTCTATTTGTTATCTTGCAAATTTTTTTATCTCTA
TTTTTGATATCCCTTTTACCAAGAAAATAAAGTGTATTTAAGATAACGTTCATTGCAAAT
TGCAAAAGCCTTCAAATTAGTTCTCAAAGAAAAGAAAAGGAAGCCAATATTATTGTATAA
TGGCAAAGATTAAGAGTTTTAGTTATGTTTTGTGTCACTTGGTTTTAGTGCTTGTGAATA
TATATATTTTTAGGAAAATGTATTATTATGATAATGAGAAATTGAGTTGGAGCCAAAGAG
CAGCACAAGAAGCAGAAAAAGTTGCATCAATTTCATGTTCTGGCCATGGAAGAGCCTATA
TTGATGGTTATGTTAATGTTGATGGAAACCCTATTTGTGAATGTTATTCTTGTTATGGTG
GCATTGATTGCTCTTTATTTTCCTCCAATTGTTCTGCTAATGTTGAAGGTGGTGATCCTC
TATTCTTGGAACCATTCTGGATGCAAAATGCAGCTAGCAGTGCAGTAGTAGTGGCAGGAT
GGCATAGAATGAGCTATGTATTTCCTAATAATCTGTCCTTTATATCCAAAGAACTTGAGA
AAAGCATAAGAAAAATACATGCAATTGCCAAGAATGCTATTACACATGGAAAATACATTA
TATTTGGAACAGGCTCTACTCAGCTTCTACATGCTGCAGTTCATGCTCTATCTATGGATA
ATAAAAATTCAACAAAAGTGGTTGCAAATAAAATCCCTTATTATTCGCTTTATAAGCTTC
AAACGGAATACTTTCAAACACGTAATTGTGAATTTGGAGGAGACTCATCCATGTTGAAGA
ACAACTCAGATTTTGCTGGAAATGTGATTGAGTTTGTGACTTCACCAAATAATCCAGATG
GAAATTTGGAAAGTCCAGTTCTAAATGGTCCAAATGTGAAGCACATTTATGATCATGCTT
ATTATTGGTCTCATTATACAGCAATTCCAGCTCCTGCTGATGAAGATCTCATGATTTTCT
CTATGTCTAAGCTCACTGGTCATGCTGGATCCAGATTTGGGTAATAAAAACAACTCTCCA
AGTGAAAAATAGTCGTTTTGGAGTTTCAAATTCCACAAGTGAAACTCCACAACACATTAT
CCTGGATTTCTCTTGTGAAATTTAAAACTCGAGAACAATGACTATTTTTAGTTACAGAAA
CAACTAATTGTTATTCATTAATGTATGTGGGCAATTGTGAAAGATGTGAATGTGTATACA
AGAATGATGGAATTTATTAGTTTGGCTGAAATGGGTACCTCAAAGGATGTTCAGTTGAGA
GCTTTAACACTATTGAAAGTTGTTGCTCAAGGAGATGACAAACAACTCTTCAATTTTGCA
CAACAAATCTTGACGGATCGATGGAAAAAATTGAGTCATATCTTCTCCCTTACTAAACGT
TTTAGCCTCCAAACAATTCCGACTCAGTATTGCATATTTTTTGAAAGAACAAGAGAGCCA
TCTCCAGGTTATGCATGGGTGAAGTGTAAGAGGAAAGAAGATAAAAACTGTCAAGAAATC
TTCAGAGTTGCAAAAATCACAGGTCGTACAGGTAGACAGTTCTTTGCAGGAGATCGTTAT
GTTCGATTCAGCTTGCTGAGAGGCCAACATGATTTTGACATGTTGATCCATCGACTGAAA
GAATTGATCTACCAAGAATATGAAGCCAATGCACAAGCCATGTCAAGTTTTTAACTATTA
GATGATTATGCATATCTTCCCTGTGATTTCATCATGTAATATTATTTACCTTAAAATATC
ATGTAAACCTTCCTAGATTTTAAGTAGGAGTGCGTCTATACTAGTTAGTAGAAGTGTATT
GTCTTGGTTCCCTTATCAGCAAGCGTAATACTACTCTTGTAGTTTCTTGTTCTTCAACTT
ATGTTACTATATGTTGTTTCGTATGGTTCGATTATAAGATTATTATTGTAGTATTGTTTT
GCTACTATCTGTTGTTTTT
