Microarray Probes on PGSC0003DMT400048375
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40327_PI426222305 |
JHI_St_60k_v1 |
AGAAGCTAATCAAGGCCCATTCTTTGGTTTTATTGCCAAGAATGAAATCTCTAATGGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048375
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048375 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G34000.1 |
+2 |
8e-35 |
89 |
63/122 (52%) |
one-helix protein 2 | chr1:12358151-12358902 REVERSE LENGTH=172 |
Transcript Sequence (1060 bp)
>PGSC0003DMT400048375 1060 pgsc_dm_v3.4
TTCCATACAAAATTTCTTTCTGATAGCATAACAACTAAGAAAAAAACCAAACACTATCTT
CTTCTTCTGACAAGAAAAAAAAATCAAGAAAATGTCAGTGGCATCATCATCTACATTCCC
TTGCATTAAATTCCAAAATTACCCTTCTTATTCAACAAAGCCTATAATACTTACTATAAG
AAATTCTCAAGCTGAAGGTCCAATTAGAAGACCAGTTGCTCCATCACCACCTAAGCCTAG
TAATATCCCACCACCAATTATTACTACTACTGCCCCTCCTAAGCCTGTGGCTGTCACAAC
TTCTGAGGGTAAAAATGTAATTACACTTGAATTTCAGAGGCAAAAGGCTAAGGAACTTCA
AGGATACTTTAAACAGAAGAAACTTGAAGAAGCTAATCAAGGCCCATTCTTTGGTTTTAT
TGCCAAGAATGAAATCTCTAATGGAAGAATGTGCAGAAATTAGTGCAAGTTTGGTTACAG
TACACTTTGTACATACACATTCTTTGCACTTGATGTTATGGAAAAACATGTATATGCAGA
TGGGCGATGTTTGGTTTTGCTGTTGGGATGTTGACAGAGTATGCAACGGGTTCTGATTTT
GTCGATCAAGTTAAGATCCTTCTCTCCAATTTTGGCATTGTAGACCTTGAATGAGACTTT
TGCTGTAAAAGAGCTTATAGATTCATTTGTTTGAGCCACAATTGTTGTATCTTACAACTC
CTTTTTACTTTTCAACAAATATATATAGCAAGTCTGATAAAGATTCTCATACTTGGACTA
CAACTTTTTTATTTAGTTTCCCACTCGGTGTTCTGAGCCCATATTAGAGTTCCGACTAAA
TTCGGATCGCGCACTGCAGGGTCCATTCAGGGGTAGTGCTCCCAACATAATTTTCTCCAT
ATCCAGTGCTCAAACTCGAGACCTGGGTGAAGCACTTCCACCAGTTCACCAAGATATGTG
ACTGGACAGGCTTCTACCTCCATCTCTTATTCCAAGTTCTTTTTACTTTAAGCATTTATC
ATTTTCGATATAATGATTTTTATTTTTTTTTGATATAAAG
