Microarray Probes on PGSC0003DMT400048297
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16998_PI426222305 |
JHI_St_60k_v1 |
GGAGTTACAGGCACCGGAGAGTGAAACTATTTATTACTATAACTACTACTTTGTTTGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048297
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Source Transcript PGSC0003DMT400048297 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G21820.1 |
+3 |
4e-21 |
84 |
56/79 (71%) |
unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9302983-9303219 REVERSE LENGTH=78 |
Transcript Sequence (494 bp)
>PGSC0003DMT400048297 494 pgsc_dm_v3.4
GAAAAACCAAATTTACAATACTGTTAGCTAAATATACCAAAAATACAAGATTTAGAAAAT
TTAGAAAGATGTCAGGGGCACAAGGTGCACAACCTAAGGAATCTTTAACAGCAACAACGT
ATGAATCAATAGTGAAAGAGGAGAATAGGCCACGAATGGATATTCATTCTCGTGAAGATG
AAAAAGGGATTCAAATTGATAAAATTCAAGATAAGGTAGATGATGCTGCTGGCAAAGGTG
GTCCCGTTTTCGGGGCTGGTAAAGACGACCACAACAAGAAGGATTTGGGAGTTACAGGCA
CCGGAGAGTGAAACTATTTATTACTATAACTACTACTTTGTTTGTAAATGGTTTTTTTCT
TTAGGGTTCTTTGTTTCTAGTTTTCAAGAATGTTATGTATACCAAGACTCTTATTTAGTT
TGTAACTTTGTAATGTCTCTTTCACGGTTTTTAATGTTTTTATTCAATAATTAAGAGCCT
TAAGTTGATAGTTG
