Microarray Probes on PGSC0003DMT400048075
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8962_PI426222305 |
JHI_St_60k_v1 |
GCCAAAAATCAAAATGGCATCTCAATATTGGTGTTGTTTTGATCTGCACAAAGTGTTGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048075
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048075 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G76490.1 |
+3 |
0.0 |
833 |
417/592 (70%) |
hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642 |
Transcript Sequence (2217 bp)
>PGSC0003DMT400048075 2217 pgsc_dm_v3.4
CAATACTTCCTCACATTCCTCCATTATCCTCTGTAAATTCCGGCGACCGGAAAAGTTTCA
CGATGGACGTTCGCCGGCGACCTGTAAAACCCCTTTACCCTTCCGAACACATTTCCTCCG
GCGAACCTCTCAAACCCCATAATCAAGATTCCTCTGTTAAAGCTTCAGATGCTCTTCCAT
TACCTTTGTATCTTACAAATGGTTTGTTCTTCACCATGTTTTTCTCTGTCATGTATTTTC
TTCTACACAGATGGCGTGAGAAGATCCGTAATGGAATTCCACTCCACGTGCTTAACTTTT
CTGAATTAGTTGCTATGGTTTCGTTGATCGCTTCGGTTATTTATCTGTTGGGGTTCTTTG
GTATTGGGTTTGTTCAATCTTTCGTTTCTAAGGGAAATAATGATTCTTGGGACGTTGAAG
ATGAATCCCCAGAACAATTTATTGATAGAACTGTTACACCACCACCTGTTCGACGAAATA
TCCCAATGAAATCTGTACCTGTTGCTGAAAAAACTGCTCAGATAATCACACCATTTTCGT
CAGAGGACGATGAGGTGGTTATCAAATCGGTGGTGGAAGGGAGAATACCATCATATTCAT
TGGAATCTAAGTTGGGTGACTGTAAAAGAGCTGCTTTTATTCGAAAAGAGGCGTTACAGA
GGAGTTCAGGGAAGTCATTGGAAGGGTTACCATTAGATGGATTTGATTATGAATCAATTC
TTGGACAGTGTTGTGAGATGCCAATTGGGTATATTCAAATACCAGTGGGAATAGCTGGAC
CTTTGCTGCTTAATGGGAAAGAGTTTTCTGTGCCAATGGCAACCACAGAAGGATGTTTAG
TTGCTAGTACTAACAGGGGTTGTAAAGCCATTTATGTTTCTGGTGGCGCTACAAGTGTTT
TGTTCAGAGATGCGATGACTAGAGCTCCTGTAGTTAGGTTTGGCAGCGCAAAGAGAGCTG
CAGAGTTGAAGTTCTTCGTCGAGGATCCAATGAATTTTGAGACTCTATCTGTTGTTTTCA
ATAAATCAAGCAGATTTGCTAGATTACAGAACATTCAATGTGCAATAGCTGGAAAGAATC
TATACATGAGGTTTAGCTGTAGCACTGGTGATGCGATGGGAATGAACATGGTTTCCAAAG
GTGTACAGAACGTTCTTGATTACCTTCAGAATGAGTACCCCGACATGGACATCATCGGCA
TATCTGGGAACTATTGCTCGGACAAGAAACCAGCAGCAGTTAATTGGATTGAGGGGAGAG
GAAAGTCAGTAGTTTGTGAGGCAATCATCAAGGAAGACGTGGTGAAGAAAGTTCTGAAAA
CTGAGGTTGCTACTCTAGTTGAGCTGAACATGCTTAAAAACCTTACTGGCTCCGCCATGG
CTGGTGCACTTGGCGGCTTCAACGCCCATGCCAGCAATATTGTCTCAGCTGTATATTTAG
CCACTGGCCAAGACCCGGCTCAAAATATTGAGAGCTCTCACTGCATCACTATGATGGAGG
CTGTAAATGATGGCAAGGACCTCCATATTTCAGTCACCATGCCTTCAATCGAGGTGGGTA
CAGTAGGAGGAGGAACTCAATTAGCATCGCAATCAGCTTGCTTGAACTTATTAGGAGTGA
AAGGTGCCAACAGAGAGGCACCAGGGTCAAATGCAAGGCTCTTGGCCACAATAGTAGCAG
GTTCGGTTCTCGCGGGTGAGCTATCCCTCATGTCAGCTATCTCAGCTGGGCAACTTGTAA
AGAGCCACATGAAATACAATAGATCATGCAAAGATGTCACAAAGTAATATGCAACAACAC
AGCTAATTTCTCCCCATCTTAATGTTTCAAAATTGTTACAGATTTTATTATTCCCAACAA
GCAACTTTCTTGAAATATATATAATCATCATCATCATCTTTGAAATAAAGGATTATAATA
CCAAATATAGGAAATAATATTATCATATTATTAGAGACAAGATGATCTGTATGCTGTGTT
GTATGTATTAATATGCAAATATTTTTTAAAAAAAGATACTAAGTGGGGAGAAGGTAGTTG
GTATCATTAAGTTTCAATTTGTGTCAAGGTGGATGACCTTATAATGTCTTTAATTTTGTA
TTTTCTTTTGTACTTGTTATTACTTTGTAATTTATTGCCAAAAATCAAAATGGCATCTCA
ATATTGGTGTTGTTTTGATCTGCACAAAGTGTTGTATCTTTTTAAATAAATTTCTTT
