Microarray Probes on PGSC0003DMT400048031
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8922_PI426222305 |
JHI_St_60k_v1 |
TTGCGTACTCAATGTTATGCTGTTAGGAAAGTGAAGCTGTACAATCCTGAGGTTTCCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400048031
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400048031 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30330.2 |
+1 |
3e-120 |
367 |
186/203 (92%) |
auxin response factor 6 | chr1:10686125-10690036 REVERSE LENGTH=935 |
Transcript Sequence (714 bp)
>PGSC0003DMT400048031 714 pgsc_dm_v3.4
ATGAAGCTTTCAACATCAGGAATGGGTCAACAAGCTCATGAAGGACAGCCTAAGCGGCAT
CTTCTGACGACTGGCTGGAGTGTGTTTGTTAGTGCCAAAAGACTTGTCGCTGGAGATTCA
GTTCTTTTCATCTGGAATGAGAAAAATCAGCTTTTTTTGGGAATTCGTCGTGCAACTCGA
CCTCAGACTGTGATGCCATCATCTGTTCTGTCTAGTGACAGCATGCACATTGGATTACTT
GCTGCTGCTGCTCATGCTGCCGCTACCAATAGCTGTTTCACTGTTTTCTTTAACCCAAGG
GCTAGCCCATCTGAGTTTGTTATTCCACTTTCAAAATACATCAAAGCTGTTTATCACACA
CGTGTTTCTGTTGGAATGCGTTTCCGGATGCTATTTGAGACTGAAGAATCAAGTGTTCGA
AGGTACATGGGCACAATTACTGGCATTGGTGACTTAGATCCAGTTCGCTGGGCCAACTCT
CACTGGCGGTCTGTCAAGGTTGGTTGGGATGAGTCAACGGCAGGCGAGAGGCAACCTAGG
GTTTCCCTATGGGAGATAGAGCCTTTGACTACTTTTCCAATGTATCCATCTTTGTTCCCT
CTTAGGCTAAAGCGGCCTTGGTATCCAGGAACTTCATCTTTTCAAGGTATTTTGCGTACT
CAATGTTATGCTGTTAGGAAAGTGAAGCTGTACAATCCTGAGGTTTCCTTGTAA
