Microarray Probes on PGSC0003DMT400047889
Probe ID | Chip | Probe Sequence |
---|
CUST_34058_PI426222305 |
JHI_St_60k_v1 |
CGTCGGAAAGTTCTACTTATAATTAAAGTGCTCCTTATCAAAGACGAGTTCATTTCTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047889
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047889 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G63130.1 |
+2 |
3e-36 |
135 |
67/107 (63%) |
Octicosapeptide/Phox/Bem1p family protein | chr5:25323190-25323857 FORWARD LENGTH=192 |
Transcript Sequence (1861 bp)
>PGSC0003DMT400047889 1861 pgsc_dm_v3.4
AGGTAACCTTACTTAGGCTTGAACAACCAACTAAGGCCTCTTCAAAACCCCTTAAATTAT
CACTTATAATATCTCCAATACTTGCAAAATAGAAAAGAAAGAAAAAAAAAGCATGGTTAG
TCCATCCAATAATTCCCATAATTTTCCTCTAAAATTCCTTTGTAGCTATGGTGGCAAGAT
TATGCCCCGTCAAACCGATGGAAAACTCCGGTATTATGGTGGCGAAACACGTGTCCTCTC
CGTTGATCGTTCCATTTCATTCGCAGAGCTATTATTGAAGTTAGGGGAGATGTCTGGATC
AACAGTGAGTTTGAGGTGTCAGTTGCCAAATGAAGATCTAGACGCTCTTGTATCAATAAC
ATCTGACGAAGATTTAGTCAATCTCATCGAAGAATATGATCATGTTTCAACAATATCATC
GTTTCTCAAGATCAGGGCTTTCTTATATCCACCAAAATCCACAAAAAAAGTTGTATCTCC
TACACCTTCCATTGCTTCTACCTCATCCACCAATAGTACCACTATTAGCAACCCCGATGC
CACGTCATCACCAAGTTCATTTTGTTCAACCGTTACTAGCCCTCCTGCGTCAACGAGGCA
TCATGATTGTCCAAGACCATATAAAAAAGTGACACGAAATTCTTTAGATGAAACAATTAA
CGGGCGCATACGTCATATTAGAACAAGATCGTCACCGGTGATGTTTCCTATTTGTCCTGA
GAAAGTCACGGCCAAGATTCCTCAATATGCTTATCATCATAGTCATGGGAATAATAGTAG
CCATATTTATATGATTCACCATGGCAACCATTGGCAATAACACTTGATATTTTCTATTGG
ACAAGGGCAATATTGGAACATATATATACTTTTTATATAGAGAAAAAGAAAACCCCATCA
AGAAAAAAAAAAGAAAAAAAAAGAGGATGAGATATATTTTTTTTTTTATGTAAGAAGAGA
GTGTATATGTCAATAACAAATTGGTAGTTTTTGTGTCATATATATGAGTCCAATTTATTT
TTTTACTACCATGGATGGATATTAACTCACCTCTTTATGTGATGCGTGCCACGTTAAATT
TCTTTCTTTTAAAAAATTATTTTTTATATATTTTTTTTAATCTTGTTGGCATTTTCCAAC
AAATCACAAAAAATGAGTCCTATATCATGTTTGCTTCCCCTCTAATTTTCTAATCTTTTA
CGTCTTTATATTTGTCTCTTTAGTATTTCTCTGCCTCAAAGAGATAATGATAAAATTTGC
GTATAAGATTTTACTAAATATGTTATTGTTATTGTGTTTAGTATTTTGTCTGTTCATTTT
CTATGTGTTAGTATATTGTATCATGATATGCAATTATATCACGTCTCTTCCTTTGGTGCT
AAGTTTCTATCTTGATTTTGTGTACTGCAGGTATATGATGATGAAATCAATTGAAACTCT
TTTTTTCATTTAGACAGGAAATTCTAGTAACCTCAAGATGGGAATTAAGTGGCAGAGTCA
TTTGGTCTGAATGCAACCTGAAGAGCCACACATAGGTAATTATTACATGTCTCTGTGTTT
ATTTTTCAAATTAAAGTCGATATGAATATTCGTTATATGCTATAAAATCTTCTTAATTTT
TTTTATTTCTCACTTCATATTCGATACTCTTTTTGTAGATTGAAGTTCACGTCGGAAAGT
TCTACTTATAATTAAAGTGCTCCTTATCAAAGACGAGTTCATTTCTAAGACTTGAAATTG
ATAACTCTAATTAAAAATGAAGAAATACTTATTACTTCAACTACACAATTGGATCACAAA
AAAATTGTTTTAGTATATGCAAAATAACTACTCCAAATGCTCCATTGAACATAAAAGGTA
G