Microarray Probes on PGSC0003DMT400047663
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22252_PI426222305 |
JHI_St_60k_v1 |
TGAGTTTTGGCTTGTGCCTCTCTGTTATGTAAGCTAGATAGTATTATATGTTAGCACTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047663
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Source Transcript PGSC0003DMT400047663 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G53486.4 |
+3 |
8e-06 |
43 |
16/35 (46%) |
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21721822-21722529 FORWARD LENGTH=104 |
Transcript Sequence (601 bp)
>PGSC0003DMT400047663 601 pgsc_dm_v3.4
CAGAAATTTTGAATAAGCACACAGCCATGAGACCTACTTCCAAAGCATTTATTCTGTTTA
TTTTATTTCTCATCTTTGTGTCATCAGGTACTGTTGAAGGCAGCTTGGGCAATGGCTTAA
ACAGCATTCACAAATTTCAAAAGGGGATGAGAGAAATACCAAGAAAGTTGATGGTGGTGG
ATGCAACGTTAGATTATGACTATGCAGGACCTAATCCCAGGCATGATCCCACTAGAAAGA
GAGGTGGCAATCACCCTTGAAGAAACTTTGCATACTGGGGTTCAAAAGAATCAGTAGTTT
TGGTTCAAATTCTATATTTTTATGTTAAGAAATCACGTAAAATATGTATAAATAATTAGT
CAAAAACTCAGTAAGCTGCGTTTTCTAGAATCCAGAGCCCATAATTTCAATATCTTTATT
CCTCCTATGAGTGTGTAGAGATTTTGTTTACAATATTGTTGCCTCAGGGCATAATAAGAA
TTGCAAGTCTCTTGATGAGATGTTGCTTGAGTTTTGGCTTGTGCCTCTCTGTTATGTAAG
CTAGATAGTATTATATGTTAGCACTATTATGTTGTTTGAGTTTTGAAATAGTGAAATAAA
G
