Microarray Probes on PGSC0003DMT400047622
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22211_PI426222305 |
JHI_St_60k_v1 |
GGGGTGTAGAATAGGTTGTATATTCCAACTCAAGTAGAAGTCAAGGAATTTTAATATGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047622
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047622 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G46680.1 |
+1 |
5e-42 |
149 |
93/215 (43%) |
homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258 |
Transcript Sequence (1078 bp)
>PGSC0003DMT400047622 1078 pgsc_dm_v3.4
CACCAGTTTTTAAAAATAATTTCTTGTCAATACAAATATTGAAACTTCTCTCTCAACTTG
GAACAAATGGAACCAGAACTTGAAAATTCTGAGATTTCCAACTTCAAAAAACCCTTTAAG
AACAAGTGTGAAAATGTGAAAAGGTTTACTGATGAGCAAGTGAAGTTACTTGAGACCATG
TTTAAACTAGGGACAAAGATAGAGCCAAGAGAGAAGCTGAAATTAGCAAGAGAACTCGGG
TTGCAACCACGCCAAGTAGCTATTTGGTTTCAGAACAAAAGGGCTAGATGGAAATCGAAG
CAATTAGAACACGAATATCGCATACTTCAATCGAATTTTGACAATTTAAATATGCAATTT
GAATCCTTGAAGACAGAAAAGGAGAGATTACTCATTCAGTTGGAGACATTAAATGATCAG
CTAGAAAACAACAACACTCGAGGAAGCGGAAGTCAAGATTCAAGAGACAGTGAATTGCAG
CATACAAGTCCAGAAAATGGATTTACAGAGTTAGAATTGAAGGATTGTTCAGGTTCGAGA
TTTGATCACAAGAGTATAAATGAAGAGGATGATGACACAAGAGATAAATACTTCACTCCC
AAAGAAGAATCAGAGTTGTGGAACCTGGAGGAATTAGGAGACAATAATTCCTTAGAACAT
TGGTGTGTTGGCTTAGGTAGTATTTCGAATTCCAAGTTGTGGGACTTTTGAGCCTCACAG
ATTGTACATAAATTTCATAAAGTAGGGAAGGAATATTTATTTATCTCGGTTTCTCTACTT
TTCCATTGTGTCCAAGAATCAGAATGTAGATTGTTTGTGAATCCTTGTTATTGTTCACAA
GAAAGCTTAACAAAAATGTTGCAGCTAGAAAAAAATATGCATGCAATGAAAGAGGAAAAA
AGAGGTAGCCCGCTACACAAAGCATCTCGTGTTAGCATAGGGGTGAAGAAAAGATCGCAC
TATAAGGGGTGTAGAATAGGTTGTATATTCCAACTCAAGTAGAAGTCAAGGAATTTTAAT
ATGTGATATATACATAAAAAATAATTTACCTAGCTACGTACATAGTGTAATTTCCGGC
