Microarray Probes on PGSC0003DMT400047621
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22289_PI426222305 |
JHI_St_60k_v1 |
ATTCTGACTCTACTGCTACCGCGCAACTTATGGAAACGAATAAACTTTGTTTTGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047621
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047621 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G46680.1 |
+1 |
2e-35 |
132 |
66/103 (64%) |
homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258 |
Transcript Sequence (1175 bp)
>PGSC0003DMT400047621 1175 pgsc_dm_v3.4
CACCAGTTTTTAAAAATAATTTCTTGTCAATACAAATATTGAAACTTCTCTCTCAACTTG
GAACAAATGGAACCAGAACTTGAAAATTCTGAGATTTCCAACTTCAAAAAACCCTTTAAG
AACAAGTGTGAAAATGTGAAAAGGTTTACTGATGAGCAAGTGAAGTTACTTGAGACCATG
TTTAAACTAGGGACAAAGATAGAGCCAAGAGAGAAGCTGAAATTAGCAAGAGAACTCGGG
TTGCAACCACGCCAAGTAGCTATTTGGTTTCAGAACAAAAGGGCTAGATGGAAATCGAAG
CAATTAGAACACGAATATCGCATACTTCAATCGAATTTTGACAATTTAAATATGCAATTT
GAATCCTTGAAGACAGAAAAGGAGAGATTACTCATTCAGGTATCCTACTTAATTTCTTTA
GTGAAGATTCTGACTCTACTGCTACCGCGCAACTTATGGAAACGAATAAACTTTGTTTTG
TTTTTTTTCAAAACAGTTGGAGACATTAAATGATCAGCTAGAAAACAACAACACTCGAGG
AAGCGGAAGTCAAGATTCAAGAGACAGTGAATTGCAGCATACAAGTCCAGAAAATGGATT
TACAGAGTTAGAATTGAAGGATTGTTCAGGTTCGAGATTTGATCACAAGAGTATAAATGA
AGAGGATGATGACACAAGAGATAAATACTTCACTCCCAAAGAAGAATCAGAGTTGTGGAA
CCTGGAGGAATTAGGAGACAATAATTCCTTAGAACATTGGTGTGTTGGCTTAGGTAGTAT
TTCGAATTCCAAGTTGTGGGACTTTTGAGCCTCACAGATTGTACATAAATTTCATAAAGT
AGGGAAGGAATATTTATTTATCTCGGTTTCTCTACTTTTCCATTGTGTCCAAGAATCAGA
ATGTAGATTGTTTGTGAATCCTTGTTATTGTTCACAAGAAAGCTTAACAAAAATGTTGCA
GCTAGAAAAAAATATGCATGCAATGAAAGAGGAAAAAAGAGGTAGCCCGCTACACAAAGC
ATCTCGTGTTAGCATAGGGGTGAAGAAAAGATCGCACTATAAGGGGTGTAGAATAGGTTG
TATATTCCAACTCAAGTAGAAGTCAAGGAATTTTAATATGTGATATATACATAAAAAATA
ATTTACCTAGCTACGTACATAGTGTAATTTCCGGC
