Microarray Probes on PGSC0003DMT400047321
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32735_PI426222305 |
JHI_St_60k_v1 |
ATGATTTTCGTGGATGGCCGGGTTTTTCAGATCATTTGCGGATGAAAGACATGAAGATGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047321
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047321 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G01180.1 |
+1 |
5e-113 |
335 |
157/231 (68%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:75633-76556 FORWARD LENGTH=307 |
Transcript Sequence (1064 bp)
>PGSC0003DMT400047321 1064 pgsc_dm_v3.4
AAATTTCCAAGCTTTTAATACTTTCATCAAATATAATTATTCACTGTAAATTTGCCTAGC
ATGAAACAAGAACCTCAGCATCTTCGTTACTCATCAAAGAAAATTTCATCTTTTGCTAAA
CCCGTTTTGTACTTCCTTTGTCTCCTTTTAGCTTATTCGCTCGGTTATCTGTCTAGCTCT
ACGCGTAACAATAGCAACCCACCTGATCATATAAACACTGTGGTCGCCCATGTAAACACG
GTAATTAACCGTGCAACAACAGAATTAGGCGGCGACCACAGTGATTTTGGGGCGGTATGT
GGTGAGGCGGTTCCACAGCAACACATCCGTCGGAAAATTCTGGAACGTGTCTTCAAGGGA
ACATCTCCGTGGGAGAATTTCCCGCCATCACACGTGGAGAGTCTCCTCAGGAAAAAGTGG
ATCAAAGGATGGGGATCAAACGGCGCGGTTTTCGAGAACTTAATCCGGAAGGTCCGACCC
AAGACCATAATTGAAGTAGGTACGTTTTTGGGTGCATCTGCTCTTCATATGTTTGAATTG
ACCCGTCGGTTGGGTTTATACGACACTCAAATCGTCTGTATAGATGATTTTCGTGGATGG
CCGGGTTTTTCAGATCATTTGCGGATGAAAGACATGAAGATGGTAAATGGAGACGTTTTG
CTGATGTATCAGTTCATGCAGAACGTGATGCAGGCGAACGCTACGGAGACCGTAGTGTAC
ACGCCTTTCTCCAGCGGATCAGCGCTGGAGAAGCTGTGTGAGTGGGGTGTGTTTGGTGAG
TTGATTGAGGTTGATGCCGGACATGATTTTCACTCGGCTTGGTCCGATATAAACCGGGCT
TTCAAGCTGTTGAAGCCCGGTTTAGAAGGTGGAGTTATATTTGGACATGACTATTTCACC
GCGGCTGATAACAGAGGAGTGAGAAGGGCTGTCAATTTGTTCGCTCGTGCTCATAATCTC
ACTGTTCAAGTTGATGGACAACATTGGGTTTTCTATATTAGCAATCCTTTGTGATCATAC
TGATATATATATTGATGGATCTTATAAGCTATTGTAAATTAAAC
