Microarray Probes on PGSC0003DMT400047179
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32697_PI426222305 |
JHI_St_60k_v1 |
TTGGGGATTTCTGCTTGAAGGAATATGGGGTGATTTCTGTTCCAGAATTTTCTCACCGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047179
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047179 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G03415.1 |
+1 |
0.0 |
572 |
292/388 (75%) |
Protein phosphatase 2C family protein | chr4:1503789-1505510 REVERSE LENGTH=468 |
Transcript Sequence (2025 bp)
>PGSC0003DMT400047179 2025 pgsc_dm_v3.4
TTCCTTTTTTATGCTTTTGCAATTAATTAATGCCAACTTCTATCTATTCCCATACTTCTC
ACTCTCTTCCCTTCTTCTCCTTTTTTCTCTTCTATTCAACAAAAAAGACTTAACTCACAT
TCTTGATCCCAGCTATCACTAAACCAAGTTGAAGTGACAATATTTTGACCAAGATAAAAA
CGAATCGCGTTGGATGCTTGTGAGTTCTACAGTTTTTTTGCTTAGTTGACATTCAGTCTG
ATCCAGTTTCATTGGGAGGAAGAACATTTCTTTACTTGTCGATCAGATGGTCTTTTTGTG
TGTCTGAGAAAATGGGGGGTTGTGTTTCTACCAGCAATCATAGTACTTGTAGTAGCAGGA
GCAACGGAGAACGAGTTTCCCCTGAATGTTTGGGGATAAGTATGTTTAGTCGAAAGAGGA
TTAGAAAAACTTTTTCTGATCCTGTTACTACATTGCAACATTTGACTTCGATACCTAATC
GGATATTCAAAAATGGAAAGAGCAAGACTTCTTGCATATTCACTCAACAGGGTCGTAAAG
GCATAAACCAGGATGCCATGGTTGTCTGGGAAGTAAGTACTGCTCGCTTGTCTAGATACA
CTGTTGTCTGTTTGGAGTGTGATATGTTTGATTTTATGTATCTGTGTGCAGGATTTCATG
GCTGAAGATGTGACCTTTTGTGGGGTATTTGATGGTCATGGTCCACATGGCCATCTTGTT
GCACGCAAAGTAAGGGATGCGCTGCCCTTGAAGCTAGCGTCGTTTTTGCAATCATTTGAC
TCAAAGCACAATGGTTCTACTGCAAATTGCTGCAGTGTTAATAAAAAATTGGATGTGGTG
GATCCTGATAAGGATGGAGGGATGGAGGATAAAGTGGACTACTTGTGGAGAGAAGCTTTC
CTTAAATCATACAAGGCCATGGATAAAGAACTAAGGTCCCATCCTAATTTAGATTGCTTT
TGTAGTGGAAGCACTGCCATTACTTTAGTGAAACAGGGTTCAAATCTTTTTATGGGCTAC
ATTGGTGATTCTCGGGCAATCATGGCATCAAAAGACAGTAATGATTCAATGGTAGCAGTT
CAATTGACTGTTGATCTCAAGCCTGACTTACCTAAGGAAGCTGAGAGGATAAAACGATGT
AAAGGTCGGGTTTTTGCTTTGCAAGATGAGCCTGAGGTGCAGAGAGTGTGGCTGCCATTT
GATGATGCCCCTGGTTTAGCAATGGCGCGGGCATTTGGGGATTTCTGCTTGAAGGAATAT
GGGGTGATTTCTGTTCCAGAATTTTCTCACCGTATTCTTACCGATAGGGACAAGTTCATT
GTTCTAGCTTCTGATGGGGTTTGGGACGTGTTGAGCAACGAGGAAGTGGTTGAGATAGTG
TCGTCAGCTCCTACACGAGCATCAGCTGCCCGAATCCTGGTTGACTCAGCTGCACGTGAA
TGGAAAACTAAATATCCAACATCAAAGATGGATGATTGTGCAGTTGTTTGCTTATTCTTA
GATGGGAAAATGGACTCTGAATCCGATAACGAGGATCAATGTTTCTCTTCTGCTACCCTT
CAGAGCAACCACTCTGGTAACGCTGTGGAATCAGACGATGGACAGAATTCCGAGCCATCT
CTGCAGAGGAACTTCACGGTCAGATCTGCTGAAGAAAACAACACCTACAAACGAATCGTT
GCAGAAGTAGCAGCAAATCAAGAAGCTATGTCAACTGAAGAACAGAACTGGTTAGGATTA
GAAGGTGTCACTAGGGTAAACTCCCTAGTTCAGCTTCCAAGATTTTCTGAAGAAAGGCCA
AGACCTTAAGTTATATATTTGTTGTTATTTAGATCCCTTTCTTAAAGTCTTATGGATATA
TATAATTTTGCTGCAGCATATCCAAGTATTGTTTATGACATATTTGGGGTTTGGTTTGTT
CACTGGGTTAAACTGACATCCATCTAACTGTAAAGTCTTAAATCTTCTTTAAGATACACT
AGTTGTTTGTGTATTCTTTTAGCTTTTATGTGTGCCACAAAATTT
