Microarray Probes on PGSC0003DMT400047085
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35770_PI426222305 |
JHI_St_60k_v1 |
GTTAGTGAAGTACTCAGTTTGCTCCCCTGTATGTGAATTGCAAATAATATGATGATGAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047085
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Source Transcript PGSC0003DMT400047085 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G26620.1 |
+2 |
8e-08 |
48 |
21/40 (53%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:9366697-9366963 REVERSE LENGTH=74 |
Transcript Sequence (561 bp)
>PGSC0003DMT400047085 561 pgsc_dm_v3.4
CCAAGTAGTAACACATACTGAACATCACACTTCAAAACAAAAGAGGAGTGTTAGTTCATA
TTTTTTCAATAACTTCAATTCATATAATTCAATTATGGCAGGGAAGAAGAGGTCTGGATT
TTCATTTTTCGGTTTATTTAAATCGAAAAGCAGTAGTAGAAGGGAAGATAATTACTCTAG
GGATGATTGTGTGAAGGCATACAAAGTATGGCCAAGTGATGAAGATAGAGGTCAATGGGT
AGCTGATCCAGGTATTGATAACAAGGCTGCTCTTTTCATCTCTAACAGGACTGCTAAGTG
GAGCAGCCCTGAAAGTTAAATTACCTATCAACACCACGAATTCGAACGAAGAAGAAGAAG
AAGATTATTATATTTAATTTCCTCCATAAATTAAACAATATTATCGTCCCACATATTCAT
TATGTTCTATAAGGTTTAGCTTTTGTATAATTTATTTCTTTGGTTAGTTAGTGAAGTACT
CAGTTTGCTCCCCTGTATGTGAATTGCAAATAATATGATGATGAATAATGTAGTGATCAA
GATTTGTTTATAAAGCTTTAT
