Microarray Probes on PGSC0003DMT400047021
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35715_PI426222305 |
JHI_St_60k_v1 |
GTGTGTGGTATCTTTGTTATTAGGGTTTTGGTTAGTTCTGATTAGCTAGGGTACTATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047021
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047021 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G02450.2 |
+1 |
3e-101 |
314 |
146/156 (94%) |
NAC domain containing protein 35 | chr2:648044-650649 FORWARD LENGTH=414 |
Transcript Sequence (1538 bp)
>PGSC0003DMT400047021 1538 pgsc_dm_v3.4
TTTCATTTCTCGTACAATAACTCCAGGTAATATAAATGGAGGAAGAAACTCTACCCCTTT
TTAGTCTATATATCATTTGAATTCCCTTCATGACAAGTTACTACTACTAAAGTTATAGTA
GTATTTTGTATGGCAATTGTCCCTTTTACTACAAACATGAGTCAATCCCAACAACAACAT
CAACAACAAGATGATGATGATAACATCAACAACACTATTAAAGGAGATGATGATGATGAT
GATCATGAACATGACATGGTCATGCCTGGTTTTCGATTTCATCCTACTGAGGAAGAACTT
GTAGAGTTTTATCTTCGCCGTAAGGTTGAAGGAAAACGTTTTAATGTCGAACTCATCACT
TTTCTTGATCTTTATCGCTATGACCCTTGGGAGCTTCCTGCTTTGGCAGCAATTGGAGAG
AAGGAATGGTATTTCTATGTGCCAAGAGATAGGAAGTATAGAAATGGAGATAGGCCTAAT
AGGGTTACAACATCAGGCTATTGGAAGGCTACTGGAGCTGATAGAATGATTAGAACGGAG
AATTCGCGGTCGATTGGCCTGAAAAAGACATTGGTTTTCTACTCAGGGAAGGCTCCTAAA
GGCATAAGAAGTAGTTGGATTATGAATGAATATCGTCTTCCACATCATGAGACTGAACGC
CTACAAAAGGCAGAAATTTCACTTTGTCGTGTCTATAAAAGAGCTGGAGTGGAAGATCAT
CCATCTCTCCCAAGATCACTTCTAACAACAAGAGCATCATCTTCTTCTTCTTCTAGAGGA
ACAACTTCCATCAAGAAACAACAAGTACAACAACAAGATTCGTCATTAATCTCTCCATTA
TACTTAGGACAATCTTCCCAACAACAAATCGATGAAAAATTAAGTACTGAAACAAGTGCA
AGTAGCACTAGTACTGATCATCACCACCATCATCATCACCATCATGTTGCTACATCACTC
GGGCTCAATTCCCTCTCAAATTCCTACACTAACATCGCGTTAGACCCTATTGGGAGCGCG
GTCAACTCATCCCTAAATATCACAACATCTACCTTAACACCTTTCACTTCATTAGTAGCA
ACAACAAATAATACTGATGATCTCCATAGACTAATCAACTTAGACCAAGTCGTCGCGTTT
CATAATAATCAACACCATTTTCATCCTCCTCCTGGTGTTGTACCCCAACAATATCCTCCA
TTGTTATTGCAACAACCACAATTAGCACCACAATCTTTACTTCATCAGGGATCACTTCCG
TCTTCCGCAGCCGCGGCTTTTTCAGACAGATTGTGGGAATGGAATTCAATTAATCAAACA
GATGGAAGCTGCAAAGATGATCACTACCAAGACAATAATCCCTTCAAGTAATTTCATGAT
CATTAAACTGCACATATACAACATATATTATATATCTACTGATATTTTTAATTTTGCTAG
CTAGCTAGCTCTATGATCAAATTAAATAATGTGTGTGTGGTATCTTTGTTATTAGGGTTT
TGGTTAGTTCTGATTAGCTAGGGTACTATTATTAAGCT
