Microarray Probes on PGSC0003DMT400046925
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35710_PI426222305 |
JHI_St_60k_v1 |
CTTCTAGTAACTACATAAGCCTGCTGCCTATTATCAATGAAAATTTCTGAATTCCATACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046925
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046925 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49730.1 |
+2 |
0.0 |
837 |
442/748 (59%) |
ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738 |
Transcript Sequence (2676 bp)
>PGSC0003DMT400046925 2676 pgsc_dm_v3.4
GGTTTCTTCTAAAACCTTTTTGTATATATTGGTAACTACTTTAGGTGTGTTTTGATATAA
GCTAATAAAGTTTAAAGATTCTAAAATGGGTGAACTCTCAAGCCAAGAACCTCTTCTTTT
GAAAAAAGATGATGAATTTGATTATCTCAATAAGACGCCACTTTTGGTATCATCAACAAA
GTTGATTCTCAAAGTAGTAATGTGGGTGGCTTTTATTACATGGGCTGCTTTTATTTTCTT
GTTGCCTACAAAATTCACTAATGAACTTTTTGGGACAATTGTTACAGCTACCAAAGGATC
TATTTTTGGGACAGCAGGCAGCACATCCTTGATATTCAGTTTCCCAATTATCTTGATTGC
ATTTCTTGCAATTATTCGTCTCGTTGTCGCGGGTGAAGATCAACCTCAAATCAAGAAGGC
TGGAAAAGGTCCAAATTTTAGATTATGGACATTCCCTGTGCTGGTGGATGGACCATTTGG
GGTTGTTACAGCTGCGGAAATGATTGGCGTTATAATCTTCTCAGTGTACATCGTCTGGGC
TGTAGTTATGTATAGTATACAGAATGTTGACCTCTTATCTTCGTATCATTTACCAGACAT
GAAAGAGAGAAGTGGTAAGTTGCTGGAGCTGACAGGTCTCCGTTTTGGATTCATTGGATT
AATCTGCTTAGCGTTTTTGTTTCTGCCTGTTGCACGTGGTTCAGTTCTTCTTCGAGCTAT
AGATATCCCTTTTGAACATGCCACTAGATATCATGTTTGGCTGGGACATCTTACTATGGC
TATTTTTAGCCTTCATGGTCTATTCTATATTATTGGCTGGGCAATTCAAGGGAGACTTTT
GGAAGAACTAGTCGGCTGGAAAAACATAGGAATAGCCAATCTTCCAGGAGTTATCAGCCT
TTTAGCTGGTTTGTTGATGTGGGTGACTTCACTTCCCGGAGTAAGGAGAAATAACTTTGA
GCTGTTCTTCTATACACACCAATTGTATGTGGTGTTTGTGGTGTTCCTGGCTTTGCATGT
TGGTGATTTCGTCTTCATGATGGCTGGAGCTGGGATCTTCCTGTTCATGCTTGATCGGTT
CCTTAGATTCTTCCAGTCACGAAAGACAGTTGACATACTTTCAGCCACATGCTTTCCTTG
TGGAACCGTTGAACTCGTTATTTCAAAACCTGCAAATTTACATTACAACGCCCTTGGCTG
GATATTCTTACAAATACGTGAGTTGTCCTGGCTGCAGTGGCACCCTTTCAGTGTCTCTTC
TAGTCCCCTTGATGGCAAACATCATCTTGCGATTCTTATAAAGGTTCTTGGAGATTGGAC
TGAAAAACTGAAGGGGAACATCTTGAATCTTTCTGTAGAACAATCTGAGACGGAGCCTCT
TTTGCAGCATAACAGGAAAATGACAGCTTCTGTTGAAGGTCCTTATGGACATGAGTCACC
ATACCACTTAACGTATGAAAATCTCATTTTGGTAGCAGGTGGAATTGGAATTTCCCCCTT
TCTAGCTATCCTGAGTGATATCCTCCACTGTATCAACGATAGTTCGCCTTGCCTGCCAAG
AAATATATTAATAGTATGGGCTATCAAAAATTCAGATGAGCTTCCACTTCTTGAGACAGT
TGACATGGAAGCAATCTGTCCACTTTTCTCTGATAAACTGAATCTTGAGATTCAAACATA
TGTGACGCGGGAATCACAGCCTTCATTGGAGGAGGGTAAAACACCCAAAGCAATGCACCA
CTCCTCAATCTCCCCTGGCTTCAACGGATGTCGAATGTCTGGTTTGGTTGGTACTGGACA
TGTCGTATGGTCTGGATTATATGTCATAGTATCCACCATAGGGTTTGTGATCACTGTAGC
ATTGCTGGACATTTTCTACATAAATCCATTCAATATAACTTACTGGTGGTACAAGGGGCT
TTTGTTGATTGGATGCATGACTGCAAGTATTCTTATATTTGGGGGTCTCGTTATCGCTTT
ATGGCATCTTTGGGAAAGGAAAACTTCATCGAAGGAGGAACCACAGGACGCCACAAAGAA
AGTTGACATCTTGCAGCAGAATGAAGCCTCTTTACACAGGAACTTTGGAGAGGCTCGATA
TGTTAATAATATTCGATATGGTCAAAGACCAGATTTCCAAGAGATATTTGGATCACATGC
AAAGAGTTGGGGAAGTGTAGATATTGGTGTGATTGTGTGTGGTCCTCCTACTCTTCAGTC
CAGTGTTGCTAAAGAGTGCAGAAGCCAGAACTTGAAGAGAAGAGGCCATCAGGCTATTTT
CCATTTCAACAGCCACAGTTTTGACCTCTAGATGACCCCAGTAAACATGGGCGGAGCTAG
ATAGGGTACATGAAAGGGGTTCATCTGAACCCCTTTCGTCGATGTTCTTATGTTTATTCC
TTCATATTCTGGCTCCGTTAATGCCAGTAAGTATCCGATAGCTCATATAAGGAGTACTTT
TTACTGCTCTAATGAGAAAAAAAAAAGGATCATATCAGCTAGTTTATCTCTGATCCTTGT
AGCATGTATCTGGTATCTGCAGTAAGCATCTTGTACATTTTCAATTGTTGTAAATGCAGC
TTTAAAAATATACATATATAACAATATCACCTATACTTCTAGTAACTACATAAGCCTGCT
GCCTATTATCAATGAAAATTTCTGAATTCCATACCA
