Microarray Probes on PGSC0003DMT400046778
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11790_PI426222305 |
JHI_St_60k_v1 |
TTTACATGTAAAGAACAATCACCTTATGAAAACTCCCATCAATTCAAAGACGTACGCGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046778
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046778 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G20140.1 |
+3 |
0.0 |
700 |
417/871 (48%) |
Leucine-rich repeat transmembrane protein kinase | chr4:10884220-10888045 FORWARD LENGTH=1249 |
Transcript Sequence (3239 bp)
>PGSC0003DMT400046778 3239 pgsc_dm_v3.4
GTCAAGTTAGGACACTGTTAACTTTCCTCCTATCTCTCTTAGCAAATATATTAGCTTCAT
GCTACTCATAAGTTTCCATTTTAAGTAAAAACCAGCCCCACAAATTCTTTCATAAATTAT
GCATTTGTTAATTTAAGTTCCGAGGTTGTGTTCCATTCACAAATATTGGCATGGGAAGTG
TTCTTTTTTCTTATCTGCTGTTTTTCTTGACAGCAGTTAGTGTTGTTCTTGCTGTTTCTT
CAGCAGATGGTTCATCTGATTCGTATCGCCTTTTGAGAATAAAGTCAGAACTTGTTGATC
CAAATGGAGTTCTTGAAAACTGGTCTGAAGGGACTAACATGTGTACCTGGAATGGAGTGG
CATGTTCAGATGATAAATCTCATATTGTGAGGCTCAATCTTACTAGTTCAGGACTAGAAG
GTCAAATATCTCAAGAATTCGCGCATCTCACTTCTCTTCGAGTGATTGATCTTTCGGACA
ATTTTCTTAATGGAACAATCTCTCCTGCATTAGGAGAGCTTCATAACTTGGAGGAATTGC
TTCTTTTCTCTAATTTTCTCACTGGTGAGATTCCTTCGGATATCGGTCGTTTGAGGAAGT
TGCAAGTTCTTAGAATTGGAGCCAACATGCTGACAGGACAATTGATACCAGAAATTGGTA
AACTTTCTGAGTTGAGAGTGTTGGCTGTTGCTTATTGCCAATTCAGTGGAAAGATACCAA
ATGAGATTGGTAATTTGAAGCAGCTGATAAATCTTGACTTGCAGCAAAACAGTCTTAGTG
GCCCCATACCAGATGCAATTGGCGGCTGCAAAAATCTTCAAAATTTTGCAGCATCAAACA
ACAGGATTGAGGGAAAGATTCCTGCTTCAATTGGTCAGCTCAAATCACTCGAAATCTTGA
ACCTGGCAAACAACAGTTTTTCTGGTTCGATTCCTGTTGAGCTGAGCCATCTTTCCAATT
TGAAGTACTTGAACTTGTTTGGCAATGAATTGGAAGGAGAAATTCCTTTTGAGCTTAACA
AGTTGGTTCTGGTTGAAACATTGGATTTGTCAAACAACAACTTTTCAGGAACCATAAGGC
TTCTCAACACTCAGCTGAAGAATCTTGAGACTTTATCACTCTCTGGTAACTTCTTAACAG
GAAGCATCCCGAGTAACTTCTGTCTCCGTGATTCAAGCTTAAGCCTACTCATTCTGGCTG
ACAATAAGCTGTCTGGGAACTTCCCGTTGGAGTTATTGAACTGCACGTCCATACGACAAC
TGGATCTCTCCGGTAACAGCTTTGGAGGAATGCTGCCACGAGGCCTCGACAGGCTAGAAA
GTCTCACAGACCTCTTGCTCAACAATAACAGCTTTACTGGAACTATACCTCCTGAAATAG
GAAACTTGACTAACTTGGAAGATTTGTACCTGTTTCATAACATGCTCTCTGGTGGAATTC
CAGTTGAAATAGGAAAGCTTCAAAGGCTGCGTGAACTATACCTCTACGAAAACCAGTTGT
CAGGAAGTATTCCAAGAGAGTTGACAAACTGCTCCAGCTTAACAAGCGTTGATTTCTTCG
GTAACCAACTTTCAGGATCTATTCCTGATAACATTGGGAGGCTTAAGAATCTTGTTATTC
TTCAGCTAAGGCAGAATGAGTTGTCAGGTCCGATTCCATCAAGCTTAGGCTACTGCAGGA
AGCTTCAAAAACTGGCTTTGGCTGATAACAAACTTTCAGGATCATTGCCACCAACTTTTC
GATTTCTCTCAGAGATGGACCTGATTACTCTTTACAACAATTCCTTTGAAGGTCCACTTC
CTGAATCTCTTTCCCTTCTGAAAAATATCAGCAAAATTAACTTTTCTCACAATAAGTTCA
GTGGAAACATTTTCCCCTTAGCTGGTTTAGATTCTCTGACAGCTCTTGACTTAACAAACA
ACAGTTTCTCTGGTCCTATTCCCTCTGAGCTAGCTTTGTCAAAAAATCTAACCCGTCTTC
GCCTTGCTAATAATTTTTTCACTGGAGAACTCCCTTCTGAATTCGGACAACTTGAGGATC
TCAGGTTTCTTGATTTATCATTCAACAATTTGACCGGAAATCTAGCACCTTCCCTTGCTG
GTCTTAAAAACCTTGGTCATTTTCTCCTTAGCTCTAACCAATTCTCGGGTGAAATTCCCA
CATGGTTAGGAGGCATAGAAGATCTTGGTGAACTCGATCTTTCGTTCAACAACTTCACTG
GAACAGTTCCAACAGAACTTGGAAACTCTCCAAAGTTACTCAAACTTTCTCTAAGTTACA
ACAGATTATCAGGCCCCATACCACCAGAACTAGGCAATCTCACAAGTCTAAATGTCTTGA
ATCTTCGAAGAAACAATCTCTCTGGTTCCATCCCTTCAACTCTTCAAAAATGCCAAAAGC
TCTATGAGCTAAGGCTCTCTGAAAACAACTTAACAGGCTCAATCCCTTACGAACTTGGTT
CTTTATCCGAATTACAAGTAATACTAGACCTCAGCAAGAATCACATTTCAGGTGAAATCC
CATCATCACTTGGAAACCTTGTAAAGTTAGAAAGATTGAATCTTTCATTCAATCAACTTC
AAGGAAAAGTCCCACCATCACTTGGAAGGTTATCAAGTTTACATAGACTCAATCTTTCAT
ATAATCATCTTCAAGGCCAAATCCCTTCCACATTTTCAGGATTCCCACTAAGTTCTTTCA
TGGGAAACAATCATAACCTATGTGGCCCACCATTACTATCTTGTTCTGAACTAAAGGAAC
ATGAGAGAATTTGGGAGCTGTCAAAAGCAAGTGTTGTAGGGATAACAGTGGCTATTGTGT
TAACAGCAACAGTTATATGCATGGTTCTGCTTTATATCATGCTGAGGATTTGGTGCAATT
GGAGAAAAGTTACAATTTCTTGCTCAGAGAATGGTGGAATTGAGAGTAAAAGTAGACAAG
GGGAAAATTGGGTATATGGAGAAGAGATCAAAAGTGGACAATATTGGAATACAACATCAT
TAGTTTCATCTAAAGAGAAGCAAATATCTAAAGGGACTTGCATGTTTAATCTTAGTGTAA
GTTCATCAGATAGCACAGAAAAACCTTTAGTTTAAATTAAGAGGTGTTTTGTTTTGTTTT
GTCTCTCTACTTTGTAAATTCTTTTGTCATGTGTTGAGATTAATTTGTTTATGTGGGGGT
TTACATGTAAAGAACAATCACCTTATGAAAACTCCCATCAATTCAAAGACGTACGCGTG
