Microarray Probes on PGSC0003DMT400046767

Probe IDChipProbe Sequence
CUST_11721_PI426222305 JHI_St_60k_v1 CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046767

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Source Transcript PGSC0003DMT400046767 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT3G48200.1 +2 6e-173 552 338/592 (57%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:17832949-17837371 REVERSE LENGTH=1088

Transcript Sequence (4583 bp)

>PGSC0003DMT400046767 4583 pgsc_dm_v3.4
CTTTTTTCTCTCTCTTATCCTTCCTTCTCTCAGTTCCACTCTCAGTCTCACGTCCTATAT
CTCTTCAACACCACTACTAAAAATATCCATTTTTTTTCTGTATTCCCCTGTTCCTCCTCA
ATTTCAACATTTTCATGCAATAAAAACAATTTCTTTCCTTATTTTTTTTTAAGTTAGAAA
GTTTTGAAGTGCCTGGTACTCATGCAAATTGGATGTAATTCTAGTTAAATGGGTCGAGAA
AAATTATTTTTGTGGCTGATTTTGCATTTCTGTGTTTTCGTCGTTTTGAGTTACGGGGTT
CGATGCGATGGCTCAGAGGTCACTTTGAAGTTATTGACTACTCCTCGTGAATTCACAAAC
CGGAATTTTGCGAATTTTGCTTTTCAAGTTTTGGCCGGTGGTAATGGTGACATTTGTGCG
GATTGTTCAACTAGTTGTAAGTTGGATGATTATGTGCCTGCAGTTTGTGAAGGTGGAGAA
GTTTCTTACACACAGTTGCTTGATGGAAATCATACTTTTGAAGTTTGCACCAATGGATCT
CTTGGAGTTGGATGTGCTCACTATAACTGGACTGTTGACACCATCCCGCCTACAGCCTAC
ATTACCACCCCAACATCTTTTACAAATGCTTCCAATGTTTCAGTGGACATAACTTTCACT
GAGCCATGTTGGAGCCAAGGTGGTTTCAGATGTGCTTCCACGAATTCCTGCAATCTTCTC
GTTTATGGAGCTGGACAGGTCGTGCCAAACACACTCAATGTTATTGAGCCAGACCTCAAA
TTTTCTGTTGTCGTGAGTCTGTCTACACGTGATCAGTATGGAAGAGTGATCTTGGTAATG
GATAAAAACTTCTGTTCGGACCCTGCTGGAAACAAATTTAAAAGGACAGACAATTCAAGT
TTATTTATACATTTTGATAGAAGGACAGTGTTCGCTGACATAAGGACTCATATACCTGAA
AGGCAGTTTCAAATTGACAGTGAAACGAGAACCGTGCGAGCAACAAATAGTACTGAAAAC
ATGGAGGTGTATTTGTACTTTAATGAACCAATTTCCAACTCATCTACGGAAATTTTGAAT
TCCCTGAGCATAAGTCAGGGATTGCTTACTCCCATTAGTGTAAATAGCTTTGGAGAACGT
AGATTTGGATTTCAGGTTAGTTCTTTCATAAGTTTATTGTACTTTATATTCTATTGCAGT
ACTTACAAATATCATTAAATCTTTTCGGCACATTTCCAGGTTAGAGGTATATCACAGACA
GCCATAGTGACATTGAGCGTAAGATCAGACTTAATATTGAGCTGGCAGGGAACCTCCATT
GCTCCTGTAGCTCCTGTTACTTTTCTATACGATATGCAACGGCCTGCTGTCAGGTTGAGC
ACAACATCTAGGATGAGAACCTGTGACGAGCAAATTCCTGTACTGATAAAGTTCGTTAAG
CCAGTGTTTGGCTTTAATAGTTCTCATGTATCCATATCTGGAGGGCAGTTGCAGAGCTTT
CAAGAAATGAGTAGAAGCATGTACACTGTCAATATACAAGCCAGAGATGATTTTGTTTCT
GTGAGCATCCCTGAAAATGTAACTGGTGATGTTGCTGGAAACATGAACCTACAATCTAAT
ATTCTCCGGCTCAAGCACTATACTGTACCAGCAATATCTGAAGCGCTTTCCATCTTGGCA
ACTTCTGCTTTCGTGGTTACGTCTTTTGCAGCAGGGCTCCTCACAGTTTCAACCGCTAGC
CTCCAATCTGTTGGTGCATACTCAAGACCAAGCTCTTTAATGACATCTGATCCTGCTAGA
AATCTTTTTGTAAATATCCCATCTTTGACAACTTTATGTTAGACTTGATGATTGTCATGC
AATACAGTTCGCATTCCATGTGGGTACTGCTTTGGTCGTTAGATACACAAGGCAGGATAT
AAATTTTAGAACTCTTAAGTCTCTTAGTGAAGGTCATGAAGTTGTTTGGCAGAGGAAACG
AGTTGTTCCCTCCTTATATAATTTTGGATAATCCTACCTTGTGAGATAACTTTTGGGGTT
TAGTTAGGCCCAAGGTCTATTTCTTAACATGGTATCAAAGTCAGACTCATTGTTGCTATT
GTGTGTCGCGATGTTGGGTCTCCATGCTATGTTGTCCATGCTCCAGATGTTCAATTCCGG
CATTCGAGAGGGCGTATTAAGTGTCCCACATTGGTAGAGGAAATGATTTGTTGTCTCCTT
ATATGGCCTTGGGCTATCCTCACCTCATGCGCTAGCTTTTGGCGTTGAGTTAAGTCCAAG
GTGCATTTTTATTTATCCATTTCTGAGATGTATTCTTGCAAGCAACAATGAGATGAGCAT
TTGGTTAGCAAACACATTTTTTGAAATGTTCAAGTATCTTATATCCATTGAGCTTAATTG
AAATTTACAAAATTCTTTGATCCATGACATTGTATTCTGAATACACATGCTTTCTTTTTG
TGTCTTGAAACAGAGAATAGCTTGCCACATCCAGTTTTTTGCGTTGACGAGATGGTTGCC
AGTTACCTTGCCAGTTGAATACTATGAATTTGCTAGAGGCCTGCAATGGAGTGTTCCCTA
CTTCAGTCTCCCATGGGAAATGGCAAGCATGCATCAATTTATGATGGGACCGGGTTCAAC
AACAGACCCTCATTCATACGGCTCTAAAATCAATGATTTTGGAATGAAGCCAGGCAAATA
CAATGTTAACAAAGCTGCAGCATTATATGGGTTGCCACTTAGTCCTATGGAATATAGATC
AATCTTCGGGAGCCAGGATCTTCTTCCGGAAGCTCAGTATATCGTGGATCCAAAATATTC
TAATGGGTGGAGGGATTTCAACAGAAGCATGTTTTGGTTAGCTGTTATTGGGGGCAGCTT
GATATTGTTGCATGCTTTGGTCCTTTTTGTTTTAAGACTGAGGAAGGACAGAGAAAAAAA
GTGGAGCTATGGAGCCTTGGTTTTTCCAAGATTTGAGATCTTTCTTACAATTCTGGCTAT
ACCTTGCATTTGCAAAGCCTCAGTAAATGTAGTTAAAGGAGGATCATCTGCAGGAATTGC
TGTTGGCATTTTGCTGTTGGGATTAGTATCATTTCTATTGTTAGCATTATTTTTGTTCCT
CTCTATTGGAATAACATTAGGGAAGCTACTGCAGTATAAGGAGGTACACCAAGTAGGGCA
GAAATTCCATTGGTATGAAGAATTAGTCCGAGTTACCCTAGGTCCTGGTAAAAGAGGTCA
GTGGACATGGAAAAATTCGCGCGATTCTAGACATATAGTCATGTTTGGGCCTCTGTTTGA
GGATCTAAGGGGTCCACCAAAGTATATGCTCTCTCAGATTGCAGTAGGAAATCCTAACAA
GCATCCTGACAAAGTCATTGCAACAGACGATGAGACGGAAGATGCGGAAGCACCTTGCAT
CCAGAAGGTGTTTGGGATTCTAAGAATATACTTCACATTTCTTGAATTTGTGAAGCGTGT
TTGTCTTGGAATTGTTGCTGGTACTTATTTGAAGAATTGGTCTTCAAAATCTCCCATAGT
TGTCCTGCTTACCATCACTTCTTTCCAGCTATTCTTCATGCTTCTGAAGAAGCCTTTCAT
TAAAAAAAAGGTTCAGTTGGTTGAGATCATCTCAGTTGCCTGCGAAACAGGTATTTTCGC
TGCTTGTATTGTTCTCATAGGAAGAGATTCGTCCAGAAATGAGACAGCAATCGGTATCAC
CATGCTTGCGCTTTTCTTCATAGCATTTTTATCTCAGCTTGGAAATGAATGGTATGCATT
ATACAGACAGACAAAGAGACTCGGTGCTGAAGACAAGTCTTTCTGCTCTGGTCTGAAAGC
AGCATCAATTGGATTCCTCTTGTTTTTCATTCCTCAAAGATTGATCAGAAAGCTTGAAAG
CGGGTCTGCACTGTTAGATCGTGTACTCAAGGAAACCGGGGATGTTACTTCATCTTGTGA
CAGGAACCGGAGTTCTGGTAGTAGAAGCTCAGGTACTGATAGACCATGGCATAAGCAATT
CAGAGAACTAGCAAAGTCCAGCTTTAGTAAAGATAGTAATGTAACTACAAGTGATCCGTC
AACAAGTCGTGTCAGATGGAGTGGATTTTGGAACCCTAAGAGAAGTGGGAGCTCATCAAA
AGATTCATCAGCAGACTTCAAGTCAAAACCAAGAGGATTGCACAAAGATTTAGAAGCTAT
TTTTGCTTCCAAGTCATAGACCTCTCTTATTCATACAACATTATGGAATACATGAGACTA
ATATTCTGGCTTTACTGGTTACTTGACTACAAAGGTGGATCTGAAGCGGGTTCTGTGAAT
TCAACTGAACCCTTTGCTTCTAGTTCGAACTATGTAACCATGTATTTGTATGCAAAAAAA
AGAAGAAGAAGAAGAAAATGTATACATATAATAAGACTACACTTATTCTGAACTCATTGA
CTTAAGTTTTACCTGAGCTTATGTATTTATATTTTGGATTGGATTTGCCACTGCTTGACT
GGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAATAATGTATAGCTC
TCAAATATAAATGCATGTTGTCT