Microarray Probes on PGSC0003DMT400046695
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11783_PI426222305 |
JHI_St_60k_v1 |
CTAGTCGGATTCTACTTCGTTGAGAAGAGAAAGGCGGTCAAAATTTCCCAGCGAAAATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046695
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046695 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G50200.3 |
+1 |
2e-53 |
177 |
88/179 (49%) |
nitrate transmembrane transporters | chr5:20436308-20437535 FORWARD LENGTH=210 |
Transcript Sequence (996 bp)
>PGSC0003DMT400046695 996 pgsc_dm_v3.4
ATGGCAATTAGTACTCGTGCTATTTTTGTGGCTACAATTGTCATATGTTCATTTTTGGCT
GTTTGTGATGGTGAAATATTGTTCTCTACCCTCAAGAAAGCTCTTGAAGTGAAGGCTGAC
CACAAAGCGGGCGTCTTGATGGCCGGGGAGGACATACTCACATTCAAGTGGTCCTTGAAC
ACTACACTCTCAGCAGGGGCAGATTCAGGCTACAAATCAGTAAAATTGCAGCTCTGTTAC
GCCCCCATAAGCCAAAAGGACCGTGCGTGGAGGAAAACAGAAGACCACCTTAAAAAGGAC
AAAACTTGTCAATTCAAAATTGTGACCGTACCATACAAATCCTCAAACAACAATTACACT
TGGACAATCAAGAGGGATATCCCAACAGCTACTTACTTTGTTAGAGCTTATGTTTTGAAT
GCTAATGGTGAAGAAATTGGCTATGGACAAAACACTGATGACAAAAAGCAAACTCTCCTA
ATCAATTCTTCACCTTCACAAGGACAAGTTCTGCAAGCTGGAGAAGCACAAGTGACAATA
ACATGGTCATTGAACAATAGCTACCCAACAGGTACAGACACAAATTATAAGACAGTGAAT
GTTAAATTATGTTATGCCCCAGTGAGCCAATTGGACAGAGGATGGAGAAAGTCCAACAAC
AATCTCAAAAAGGACAAAACTTGTCAAATTAACCTCGTCACCATGCCATATAAACCTTCA
AACAACAATTTCACTTGGACTATACACAAGGATGTTCCTACTGCTACCTATTTCATTAGA
GCTTATGTTTATGACTCTACTGGTGAAGTTGTTGCCTATGGCCAAACCACAGATGCTCAC
AAGAAAACCAACTTGTTCAAAATCACAGCAATCACAGGCCGACACATCACCATAGACGTA
TGCGCAGCCTGTTTCTCCGTTTTCTCCATCATCTCCCTAGTCGGATTCTACTTCGTTGAG
AAGAGAAAGGCGGTCAAAATTTCCCAGCGAAAATGA
