Microarray Probes on PGSC0003DMT400046624

Probe IDChipProbe Sequence
CUST_11778_PI426222305 JHI_St_60k_v1 CCCTGTGGATGTTATGTAATGTACTAATCTTATAGGCTATAACAAGAATTGAGATGCATC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046624

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400046624 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G03340.1 +1 0.0 1427 708/795 (89%) ATPase, AAA-type, CDC48 protein | chr5:810091-813133 REVERSE LENGTH=810

Transcript Sequence (2818 bp)

>PGSC0003DMT400046624 2818 pgsc_dm_v3.4
AAAAAAAGAAAACAAAAACTATGAGCGGACAGGTGAATTGTGTGTTGAAACGACAAGTAT
ACAGTATTACTCTGGCCAACTTTGTTCTTTTTCCTTGTGCTTCTGCAACTTTTTGTTTCT
GCACCTCTGTAAAATACTGCTCTCATGGCGGACCCGAACTCTTCCACTTCCGACTCGAAA
AACAATAAAAAAGATTTTGCTACTGCAATTTTGGAGAGGAAGAAATCTCCTAACCGCCTT
ATTGTTGATGAGGCCATAAATGATGATAATTCAGTGGTATCTATGCACCCTGCTAAAATG
GAAGAGCTCCAGTTGTTTAGAGGAGATACTGTATTGCTAAAGGGTAAAAAACGGAAGGAC
ACTGTTTGTGTAGTCCTTGCGGATGAGCAATGTGAAGAACATAAGATCAGATTGAACAAA
GTCGTTCGGGCGAACCTTCGGATTCGTCTTGGGGATGTTGTATCTGTGCACCAGTGTCCT
GATGTTAAGTATGCGAAGCGTGTTCATATTCTTCCAATTGATGATACAATTGAGGGGATG
ACTGGCAACCTGTTTGATGCCTACTTGAAGCCATACTTCTTGGAGTCTTACCGCCCTGTG
AGGAAGGGCGATCTCTTTGTAGTCAGAGGTGGCATGCGAAGTGTTGAATTTAAAGTGGTT
GAGACAGAACCTGGAGAATATTGTGTTGTTGCACCTGATACAGAGATCTTTTGTGAGGGA
GAACCAATCAAGCGTGAAGACGAGGAGAGACTAAATGAAGTTGGATATGATGATGTTGGG
GGTATGAGGAAGCAAATGGCTCAGATTCGTGAGCTGGTTGAACTCCCTCTGAGGCATCCA
CAGTTGTTCAAGTCAATTGGTGTGAAACCACCGAAAGGTATTCTCCTGTATGGTCCTCCA
GGATCGGGGAAAACCCTGATTGGAAGAGCGGTGGCAAATGAGACTGGTGCCTTTTTCTTT
TTGATTAATGGGCCTGAAATTATGTCCAAATTGGCTGGTGAGAGTGAGGGTAACTTGAGG
AAGGCATTTGAGGAAGCCGAAAAGAATGCGCCGTCTATTATATTTATTGATGAGTTAGAC
TCGATTGCTCCAAAGAGAGAAAAGACACATGGTGAAGTTGAGCGGCGAATAGTTTCCCAA
CTTTTGACATTAATGGATGGGCTCAAGTCTCGATCACATGTGGTTGTCATGGGGGCTACC
AACAGACCAAACAGTATTGATCCTGCTCTCAGGAGATTTGGAAGATTTGATCGGGAGATT
GACATTGGCGTACCAGATGAAATAGGGCGGCTGGAGATCCTACGGATTCATACTAAAAAC
ATGAAGCTTGATGATAATGTTGATCTAGAGAGGGTTGCAAGAGATACACATGGTTATGTC
GGAGCTGATCTTGCTGCCTTGTGCACTGAGGCTGCGCTGCAGTGTATCAGGGAGAAAATG
GATGTTATTGACTTGGAGGATGAGACCATTGATGCTGAAGTGTTGAATTCAATGGCTGTG
ACTAATGAGCATTTTCAAGCTGCTCTGGGTGCTTCAAATCCATCAGCACTACGAGAAACG
GTAGTGGAGGTTCCCAATACCTCTTGGGAGGATATTGGGGGACTGGAAAATGTCAAGCGG
GAACTTCAAGAGACTGTTCAGTATCCGGTTGAGCATCCTGAGAAGTTTGAGAAGTTTGGA
ATGTCACCCTCTAAAGGGGTACTTTTCTATGGACCACCTGGTTGTGGCAAAACTTTACTG
GCCAAAGCTATTGCAAATGAGTGTCAGGCTAACTTTATTAGTGTGAAAGGGCCGGAGTTG
CTCACGATGTGGTTTGGAGAAAGTGAAGCAAATGTTCGGGAAATATTTGACAAGGCACGG
CAATCTGCTCCATGTGTACTGTTCTTTGATGAACTCGATTCCATTGCTACACAGAGAGGA
AATTCAGTGGGAGATGCTGGTGGTGCTGCTGATAGAGTACTCAATCAATTGTTAACGGAG
ATGGATGGAATGACAGCAAAGAAAACAGTTTTCATTATTGGGGCAACAAATAGGCCAGAC
ATTATTGACCCTGCATTGCTCAGACCAGGTCGTCTAGACCAATTAATTTACATCCCCCTC
CCGGATGAAGCTTCCCGTCTTCAAATCTTCAAAGCATGTTTGCGTAAGTCCCCCGTCGCA
AAGGACGTAGATCTGTCAGCTCTATCACGGTATACACGTGGTTTTAGTGGTGCAGACATA
ACTGAGATTTGTCAGCGAGCATGCAAATACGCCATTAGGGAAAACATTGAAAAGGATATT
GAGCGAGAGAGGAAGAGGAGCGTGAACCCTGAAGCCATGGATGAAGATGACACTGATGAA
GTGGCTGAAATAAAGGCTGCACACTTTGAGGAGTCCATGAAATATGCTCGAAGAAGTGTG
AGTGATGCTGACATTAGGAAGTACCAGGCTTTTGCTCAAACATTACAACAATCACGGGGA
CTTGGAACTGAGTTCAAATTTGCAGAGCATGCAGCTAATGCTACACCAACCGGGGCAACA
GCCGATCCATTCGCTTCTGTTAATGCTGCTGGAGACGAGGACGACTTGTACAGTTAAGAA
GTTAACCTTGAGCACAAGGATGCTAGGGATGCTGGAAAAATGGAATGTTAGTGTAAGTAG
AATAACTAGGTGTGTTATCATGTTGCAACTTTTGTATTAAAGAAATATTAGTGACAATGC
ACCTAAATGTTTTTTCCCCTGTGGATGTTATGTAATGTACTAATCTTATAGGCTATAACA
AGAATTGAGATGCATCTGTCTTTGATAGATTGTTGATTGTTCTCATGATATAACTTGA