Microarray Probes on PGSC0003DMT400046598
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11851_PI426222305 |
JHI_St_60k_v1 |
CTTTATTTTGTTGGGCTGGAAGGTATTCATAGTTGTTGCCTTTTTGGCTTGTAAATTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046598
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046598 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G62940.1 |
+1 |
2e-55 |
191 |
153/379 (40%) |
Dof-type zinc finger DNA-binding family protein | chr5:25257183-25258504 REVERSE LENGTH=372 |
Transcript Sequence (1422 bp)
>PGSC0003DMT400046598 1422 pgsc_dm_v3.4
CTGAATACATACTTCTCTCTCACTACCAATTAAAGTCTATAATCCACTTATAAGAATATT
TTAAAGAGTCGAAGCAAGCAAGAAGAAACTGAGCAAATATTAACTGTTGTGTTACATTTA
GAAAAAAATTGCAGCTATAGCTCTGGCAATTGAAAAGAACTAATGGGGATTACTTCTCTA
CAAGTTTGCATGGATTCATCTGACTGGTTACAGGGCACAATTCACGAGGATTGTGCAGCA
GGAGGAGGAGGCATGGATTCTTCTTCTTCACCATCTGGTGGTGATCACATTAACAATCTA
ATGACATGTTCAAGGCCCATAATAGTAGATCAAAGAAGACTAAGACCACCACATGACTAT
TCCATCAAATGTCCTCGTTGCGACTCTACCCATACCAAATTCTGTTACTACAACAATTAC
AGTCTCACTCAACCTAGATACTTCTGCAAGACTTGTCGTAGGTACTGGACTAAAGGCGGC
ACGTTAAGAAACATCCCTGTTGGTGGTGGCTGCCGCAAGAACAAAAAAGTTTCATCCAAA
AAATCATCTACTAATACTAATGAAAGTACACCTTTATCTACTACTACTACTAATAATAAC
AACATTCCAGAAATGCCCTTTCCTCATCACTTCATGAGTAGTACTAACTTTGGGCATCAT
GGTAATTTCATGCTAGAAAATCAAGCCCCAATTATTGATTTTATGGAAAGTAAGTACGAG
GCTTTAGTGGGGAGTAGTAGTACTACTACTAATTCAAGATTAAACCAAGATTTATTTCTT
GGGAATTGTGATAATAATAATATTGGAATGATGATGATGAGTGGTAATAGTAGTACTACT
GGATTTGTTCATGATAATAATATTGTTGCCACAAATTATCCATTTGGAATAACGAGTACT
ATGGATAATATTGGGAACAATTTTGGAATGTTGTTACCATATGAAGATCATCATCATGAG
GAAGTACAAAATATTAATGCAGTTGATGTGAAGCCAAATCCCAAAATTTTGTCATTGGAA
TGGCATGATGATCAATTAGGTGGCAACAAAGAATCGTCATTTGGGTATTATTCTGGTAAT
GGCGGCCTAGGATCTTGGACGGGTTTGATGAATGGTAATTGTTATGGATCATCAGCAACA
AATCCTTTAGTTTGAAAATTAATTAAGTTTAGGGTTTCATGTTAATGCTATGAGTGCAAG
TTAAAGAGTATTTACCTCTTCTTAAATTTTGCATAAACTCCTTTTTGGAGTGAAAAGTGT
GTTTGCTCTCTCTAACTTTTTATCCATGTTGAGGACTTTTGGTGTGAAGAAGAGTCCAGA
GATTTTACTATTAAAATTTGCTTTTTAGTTATTCTCAAATCTTTATTTTGTTGGGCTGGA
AGGTATTCATAGTTGTTGCCTTTTTGGCTTGTAAATTTGTTT
