Microarray Probes on PGSC0003DMT400046345
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13746_PI426222305 |
JHI_St_60k_v1 |
TGTTTAGGAGAAAAACTTTGATTGATTAGGTCATTGGGAGATGATCATCAGATTCGTGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046345
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046345 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G53130.1 |
+2 |
0.0 |
777 |
445/729 (61%) |
cyclic nucleotide gated channel 1 | chr5:21537830-21540490 REVERSE LENGTH=716 |
Transcript Sequence (2770 bp)
>PGSC0003DMT400046345 2770 pgsc_dm_v3.4
CTTATACAGAAAAAATTGACACACATATACATATTACTTCTCCTAAACTTCACTTCATTA
TTCAATGCCCATGTAAGTTATCTCCAAATTATGTTCATTTCACCATAGAAGCTGAAATAT
GATGAATCCCAACCAGGACAAATATGTAAGGTTTGAGGATTGGAAGTCAGAACAATCATC
CTTCAGCATTGACAATGAAAATTCTCAGGATAATAGGCCATTTTATGTCAGAAAACCATC
ATTAAGCTCGTTGATGAGCAGCGTTAAAAGAAGGTTCGAGAGGGGTTCTGAAAGAATTAG
TAGCTGGAGAAAATCAATTCGAGTGTATCCTCTAACTGATAAGCCAACAAAAGATCAATA
TGTAGAACCAAAGAAGAAAGTTCATGATCCTCAGGGGAGATTTCTTCAGCAATGGAACAA
AGTATTTGTATTGGTTTGTATAATTGCTGTGTCACTGGATCCGTTGTTCTTCTACATTCC
TGTCATTGATAACGACAAAAAGTGCCTCGATTTGGACAGGACGCTAAAGATCACCGCTTG
TGTTCTTCGTTCTATCACTGATCTTTTCTATATCTTTCACATTATCTTGCAATTTCGTAC
TGGCTACATTGCTCCTCCTTCTCGAATATTTGGAAGAGGTGAGTTGGTTGAAGATTCCTA
TGATATAGCCAAGCGATATTTGTTATCACATTTCATCGTTGACGTTGTAGCAGTCCTTCC
ACTCCCACAGATTGTGATATTGGTTGTCACTCCCAACGCGAATGGCTCTATTGCTTTGGC
GACGAAAGAAATGTTAAAGATTGTCATTTTTGCTCAATATTTTCCAAGAATTTTTAGAAT
TTATCCATTGTGCAAAGAAGTAACAAGGACTTCAGGCTTATTTACTGAAAGTGCATGGGG
TGGAGCTGTTTTCAACCTTTCCCTCTACATGCTAGCCAGTAATGTAATTGGAGCATTTTG
GTATTTGTTCTCAGTAGAACGCCAAGATACATGCTGGCGCAATGCGTGTGCAAAGATCCG
TGGCTGTTCATTAGACTACTTATATTGTGTCAAAAGTTCGATTGAAAATGCTTCCTTACT
GAATTCTTCTTGCCCTCTCGTGAAACAAGAAGATATACATGATCCAAATGTCTTTGATTT
TGGAATCGCTCTTGATGCTCTTCAGTTTCGGATTGTGGAGAAAAGGAAATTCTGGACCAA
ACTCTTCTATTGCTTTTGGTGGGGGCTGAGAAACTTAAGTTCTCTTGGCCAAAACCTGAA
GACAAGCACTTTCGTCGGAGAGATTCTCTTTGCCGTCTTCATCTCAATTATCGGGCTTAT
CTTGTTTTCCTTGCTTATTGGCAATATGCAGAAATATTTGCAATCTATCACGGTTAGAGT
AGAAGAGATGAGAGTGAGAAGGCGGGATGCAGAACAGTGGATGTCTCATCGCATGCTTCC
TGACAATCTGAAAGAGCGAATTAGACGACATGAACAGTACAAATGGCAAGAAACCAGGGG
AGTTGAGGAAGATTTACTGCTTCAAGATCTTCCTAGAGACTTGAGGAGAGATTTAAAGCG
CCATCTCTGTTGGTCTTTTCTCAAAAAAGTTCCCATATTTGAGAAAATGGATGACCAATT
ACTGGACGCGTTGTGTGACAGACTGAAGCCAGCACTCTTCACAGATAAGAGCTTCATAAT
CCGAGAAGGCGATCCAGTAGAAGAAATGCTCTTTCTAATGAGAGGTACACTGTTAACTAT
GACCACAAATGGTGGAAGGACTGGTTTTTTCAACTCTGTTCATCTCAAAGCTGGTGGCTT
CTGTGGAGATGAGCTTTTAACATGGGCTTTAGACCCTCATCCTTCCTCCAGTAGTCTTCC
AATTTCGACTAGAACAGTACAGGCTGTAACTGATATAGAAGCTTTTGCCGTCACTGCTGA
TGACCTCAAGTTTGTCGCCGCACAGTTTAGACGTCTAAATAGCAAGCAGATTCGGCATAC
TTTCAAGTTCTGCTCACAGCACTGGAGGACATGGGGTGCATGCTTTATACAAGTAGCATG
GCGTCGATACTGCAGGAATAAGCTCGAGAAATCTTTACGAGAGGAAGAAGATAGACTGCA
GGCTGCATTGGCAAAAGAGAACACAAATACAACAAGTCTTGGAGCTACCATTTATGCATC
AAGGTTTGCTGCTAATGCTCTGCGCGCCTTGCGACGTAAGCACGCAACTGGTGCAAAATT
ATCTCCCACATTACCTCTGCTGCTTCATAAACCATCCGAACCAGATTTCAGTGAGGAAAA
TGATTCATGAGGTGGGGAGGATAATTAACTAGAAATGTTGGAAGTTGTTCATATTGGTGG
ATTTACATTTTCTTTATACTTAATAAAAACAACTCCTTGGATAGTACATATATTATGTCT
TGATTCATTATGATAATTGTAGAAAGAAACAGGGAGTTCTGTTTAATTTATATCCAAGTT
TCTATTGAATGTAAAAGTTCGTGCTTGAAAGATAACACGTGGAAATCAATTGACATGTTT
CCTCCAGATTATTATTTCTTAGGTAGTAACGTTGTTATGTCAGATGGAATTATTTATATG
ATGGCGAAGACAAAGAGGAATGAAAAATTCAATCAATTGTAGTATATTACGTTTTTGTTT
GGAGAAGGAACAATTTCTAGAGGAATTATTGTTTCCATATACAATACAAAGGAGAAGACA
TGTTTTATGTTGTTTAGGAGAAAAACTTTGATTGATTAGGTCATTGGGAGATGATCATCA
GATTCGTGAG
