Microarray Probes on PGSC0003DMT400046054
Probe ID | Chip | Probe Sequence |
---|
CUST_21729_PI426222305 |
JHI_St_60k_v1 |
TTCCTTGCTCTTGAACGTATCAATCTTCTTGGCTCCACTGCAAGACACCATTTGAACAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046054
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046054 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G76520.1 |
+1 |
1e-135 |
400 |
203/393 (52%) |
Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390 |
Transcript Sequence (1401 bp)
>PGSC0003DMT400046054 1401 pgsc_dm_v3.4
AAAACTCTGGTCAAAGTTGCTCAACTTAATTAATTGAGGATGGCATTTGTGGAGTTGTTT
GTGGTGGCATTAGTGCCTGTTCTTAAAACACTCATAATTACTGCTGTTGGTTTATTCCTT
GCTCTTGAACGTATCAATCTTCTTGGCTCCACTGCAAGACACCATTTGAACAATCTTGTG
TTTTATATATTTACTCCAGCGTTGGTGGCAAGCAGCTTGGCTGAAACAGTAACATCGAGC
AACATTGTTTCATTATGGTTCATGCCAGTAAACATCCTTCTCACCTTTATTATCGGTTCA
GTACTTGGATGGATACTTGTGAAAATCACAAAAACTCCCATACATCTCCATGGCCTAGTT
ATTAGTTGTTGTTCTGCAGGGAATTTGGGGAACTTGCTTCTCATCATAATTCCAGCAGTA
TGTGAGGAGAAGAATAGTCCTTTTGGGGATTCAATTACATGCTCCACTAATGGGAAGGCC
TATGCATCACTATCTATGGCGGTAGGAGCAGTGTATATTTGGACATATATCTATAACATG
ATTCGAGCATCTGGAAGTCAACATAATAATACCTCAACACAAGTCCCAAAATTACCTCCA
ATGGATATGGACCATGAATCTCAACTTGCACTGCCTCTCATTGCATATCAAACCACACAT
GATCATCATCAGGGACATGTTGTGAAAAAGATGAAACAACATATCAAAACATGGACACAA
AGAATCAAGTTCAAAATGTTATTTGCACCCTCAACAATTGCTACGATTGTTGGGATCTTA
ATTGGCGTATCATCTTTGCTAAGAAAGTTAATCATTGGAAATGAGGCTCCATTGCATGTC
ATCGATAGCTCTGCATCTATGCTTGGAGAAGCTGCAATACCAGCAATGACATTGATAGTT
GGAGCAAATCTTCTTAAAGGGCTGAAAAAGTCAGAAGTAGGTGTGTGGATTGTGATAGGC
ATTCAAGTAATACGTTATGTAGCATTGCCACTATCAGGAATTTGTGTTGTCAAAGTTGCA
CGTCATTATGGGTTGGTTGGATCAGATTCATTATATCAGTTTGTACTTCTCTTGCAATAT
GCACTTCCCTCTGCCATGACCATAGGTACAATTACACAGTTGTTTGAAGTTGGTGAAAGT
GAATGTTCAGTGATTATGCTATGGAATTATGCTCTGGCATCAGTTGCACTTACTCTATGG
ACGACTTACTACATGTGGATTTTATCTTAAGTTACTAGATAATGTTGCCCGTGCTATGCA
CGGGCCCAATAATATAAATGGTATGTTTTGGGGCTACTAACGGAGTTTTTGAAGCGATTG
TTTGCGTGGATAAAGGAATAAGTTTTTTTATTACAAAGTTGTACTTTCTTTAACGCTATT
TAAGGCATAATAAGACTACCA