Microarray Probes on PGSC0003DMT400045846

Probe IDChipProbe Sequence
CUST_50330_PI426222305 JHI_St_60k_v1 CCAGGCTTACTCCGGAAGTTATTTTCGAAACAAGGTTCTGTTGCTAAAAGTAAAAAATAG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045846

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400045846 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G36550.1 +1 3e-100 327 226/674 (34%) ARM repeat superfamily protein | chr4:17245400-17247926 REVERSE LENGTH=718

Transcript Sequence (2139 bp)

>PGSC0003DMT400045846 2139 pgsc_dm_v3.4
ATGTACATGGAGCTATTTCAGTTTATAACTAGAGTTTCAGTATTACTTCCTGCAATTGAA
GCAGCCCGTCCTGGATGCTCTTCCGGCAGAGAGGCACTTTGCCGGTTGAACATTGAAATT
GACAAAGCCAAGACACTGCGTCAGCATTGCACTGAATCTAGTAAGCTATACTTGGCGCTA
ACAGGAGATTCTATACTTTCAAGATGTGAGAAATCAAGAAACTTGTTTAAGCAAAGCTTA
AGCCAGGTGCAAAATCAGGTTCCAGTATCGCTGGCTGCAGAGATTTCACAACTGATCGCT
GAACTGAGGGGTGTGGTATTCAGCTTGGACCCATCTGAAGAGGAGGCAGGGAAGGTTCTA
AAGGAATTACTTCGCCGATATGTTAATACAACAGATTCAGCTGAAGAGCATGCCTTTGAG
GCAATTCAAGTTGCAATGTGGAAGCTTCATATCACATCTCTAAAAGCTCTTTCAATTGAG
AAAGGATCCATAAAAAAACTGCTGGATAGAGTTGGTGAGGGTGAGACATCAAAAAGGAGG
ATCTTATCAATATTTCTGAAGCTCCTTAATAAGCATGGAAAATCAATTGTGACAGAGCAA
ACAGAGAATGGCTCTCTTCAGCAGGAAGACTCTTACCAATGTGAAGCGAACTCTCGTTTG
GGATGTCAACTTGATGATGCTGAAGTGGACGTTCTGAGGAGCTCTCTACCACCGGATGAG
TTTAAATGTCCTTTGTCTTTGAGATTGATGTATGAGCCTGTTGTAATTGCATCTGGCCGA
ACATATGAAAGATTTCGGATTCTGAAATGGTTTGCTGAAGGTAATGATACATGTCCAACA
ACTAGAAGGAAATTGGCTAACTTATCTTTGATCCCGAATCACACAATGAAGGACCTAATA
TCAAGGTGGAGTGCAACACATGGAGTTAGCGTTCCCGACCCCAGCATGGAGGCTTCAGGG
GCTCACTTGTTGGAATCTCGTTTTAATTCAATCGCTAGCTTGAGCAGCTCAATGAATAAT
CTACTTCTTCCCAGCTTCAGCAATTTATCTCATGAATCTTCAGATGCTGGTCAAGTGTCC
TATGCTAAGACACTAAGCAACTTCGATGCGATCTCAGAGGAAAGCAATGACAGTATTCAC
AGAGTTCAATTTCAAGATATGGACCTGAATCCTTTAACCAGGCTCAGTTCACTTTCTTGG
GGGTCACAATGCATCTTGGTCGGAAAAATTAGTAACATTTTCAAATATAACGATCAAGCT
TGCAATTGGATGTCATTCGAGGATTTTGTTCCAGCAATGATTAGATTTCTGAAAGATGCA
CATGATTTAAATGATCTAAATTCCCAAATACTGGGATGTCTATCATTATCAACAGTTCTG
CAGAAATGCAGGAGCAGTTTGGCATATTTGAATGACGACACTTTTGCACTTCTGGTATCA
TTTCTTGGAACGGAGGTTTCCAAAGAAGCCCTTTCTGTATTGAAGGTGTCGTCCTGCCAC
CAATATTGTCAACAAAAAATTGTGGCTTCGGGTGCTCTGACTCCCATTCTAAAGATGCTT
GATGACCAGAACAGAGAATTGCACGAACCAGCCATCAAAATATTATGTAACTTGTCTGGA
AACAGCAGAATTGTTTCCTTCATCACACTTTCAGATGTCATTCCCAAGTTGATCCCTTTT
CTAGAAGATACAGCTCTAGCAAGAGACTCTCTTATTATTTTGAAAAATCTGTGCATCACT
GAAGTTGCTACAGCTTCCGTAGCTGAGACTGATGGATGCATTCCTTCAGTTGTGAAGCTA
CTCGACAGTGATAGTCTTGAGGATCAGGAGCATGCAGTGTCTCTCCTTCTCTCTTTGTGC
TCTCAATGCGTTCAGTACTGTAAGCTTGTCATCCACACGGATGAACGAGTCTTTTCTGAT
CTCGCCAATATATATGCCAACGGAAGTAGCAATGGGAAGGCAATGGCTTTGAAGTTACTG
AGCCTGTTTAATAATAATGGAGAATCTTCAGTTGCAGATGTTGACATTTCTAAAGTCTCT
ACCGTGGACTATACTCAGCGAAAATCCAGTTCAAAGGCACCAGGCTTACTCCGGAAGTTA
TTTTCGAAACAAGGTTCTGTTGCTAAAAGTAAAAAATAG