Microarray Probes on PGSC0003DMT400045846
Probe ID | Chip | Probe Sequence |
---|
CUST_50330_PI426222305 |
JHI_St_60k_v1 |
CCAGGCTTACTCCGGAAGTTATTTTCGAAACAAGGTTCTGTTGCTAAAAGTAAAAAATAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045846
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045846 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G36550.1 |
+1 |
3e-100 |
327 |
226/674 (34%) |
ARM repeat superfamily protein | chr4:17245400-17247926 REVERSE LENGTH=718 |
Transcript Sequence (2139 bp)
>PGSC0003DMT400045846 2139 pgsc_dm_v3.4
ATGTACATGGAGCTATTTCAGTTTATAACTAGAGTTTCAGTATTACTTCCTGCAATTGAA
GCAGCCCGTCCTGGATGCTCTTCCGGCAGAGAGGCACTTTGCCGGTTGAACATTGAAATT
GACAAAGCCAAGACACTGCGTCAGCATTGCACTGAATCTAGTAAGCTATACTTGGCGCTA
ACAGGAGATTCTATACTTTCAAGATGTGAGAAATCAAGAAACTTGTTTAAGCAAAGCTTA
AGCCAGGTGCAAAATCAGGTTCCAGTATCGCTGGCTGCAGAGATTTCACAACTGATCGCT
GAACTGAGGGGTGTGGTATTCAGCTTGGACCCATCTGAAGAGGAGGCAGGGAAGGTTCTA
AAGGAATTACTTCGCCGATATGTTAATACAACAGATTCAGCTGAAGAGCATGCCTTTGAG
GCAATTCAAGTTGCAATGTGGAAGCTTCATATCACATCTCTAAAAGCTCTTTCAATTGAG
AAAGGATCCATAAAAAAACTGCTGGATAGAGTTGGTGAGGGTGAGACATCAAAAAGGAGG
ATCTTATCAATATTTCTGAAGCTCCTTAATAAGCATGGAAAATCAATTGTGACAGAGCAA
ACAGAGAATGGCTCTCTTCAGCAGGAAGACTCTTACCAATGTGAAGCGAACTCTCGTTTG
GGATGTCAACTTGATGATGCTGAAGTGGACGTTCTGAGGAGCTCTCTACCACCGGATGAG
TTTAAATGTCCTTTGTCTTTGAGATTGATGTATGAGCCTGTTGTAATTGCATCTGGCCGA
ACATATGAAAGATTTCGGATTCTGAAATGGTTTGCTGAAGGTAATGATACATGTCCAACA
ACTAGAAGGAAATTGGCTAACTTATCTTTGATCCCGAATCACACAATGAAGGACCTAATA
TCAAGGTGGAGTGCAACACATGGAGTTAGCGTTCCCGACCCCAGCATGGAGGCTTCAGGG
GCTCACTTGTTGGAATCTCGTTTTAATTCAATCGCTAGCTTGAGCAGCTCAATGAATAAT
CTACTTCTTCCCAGCTTCAGCAATTTATCTCATGAATCTTCAGATGCTGGTCAAGTGTCC
TATGCTAAGACACTAAGCAACTTCGATGCGATCTCAGAGGAAAGCAATGACAGTATTCAC
AGAGTTCAATTTCAAGATATGGACCTGAATCCTTTAACCAGGCTCAGTTCACTTTCTTGG
GGGTCACAATGCATCTTGGTCGGAAAAATTAGTAACATTTTCAAATATAACGATCAAGCT
TGCAATTGGATGTCATTCGAGGATTTTGTTCCAGCAATGATTAGATTTCTGAAAGATGCA
CATGATTTAAATGATCTAAATTCCCAAATACTGGGATGTCTATCATTATCAACAGTTCTG
CAGAAATGCAGGAGCAGTTTGGCATATTTGAATGACGACACTTTTGCACTTCTGGTATCA
TTTCTTGGAACGGAGGTTTCCAAAGAAGCCCTTTCTGTATTGAAGGTGTCGTCCTGCCAC
CAATATTGTCAACAAAAAATTGTGGCTTCGGGTGCTCTGACTCCCATTCTAAAGATGCTT
GATGACCAGAACAGAGAATTGCACGAACCAGCCATCAAAATATTATGTAACTTGTCTGGA
AACAGCAGAATTGTTTCCTTCATCACACTTTCAGATGTCATTCCCAAGTTGATCCCTTTT
CTAGAAGATACAGCTCTAGCAAGAGACTCTCTTATTATTTTGAAAAATCTGTGCATCACT
GAAGTTGCTACAGCTTCCGTAGCTGAGACTGATGGATGCATTCCTTCAGTTGTGAAGCTA
CTCGACAGTGATAGTCTTGAGGATCAGGAGCATGCAGTGTCTCTCCTTCTCTCTTTGTGC
TCTCAATGCGTTCAGTACTGTAAGCTTGTCATCCACACGGATGAACGAGTCTTTTCTGAT
CTCGCCAATATATATGCCAACGGAAGTAGCAATGGGAAGGCAATGGCTTTGAAGTTACTG
AGCCTGTTTAATAATAATGGAGAATCTTCAGTTGCAGATGTTGACATTTCTAAAGTCTCT
ACCGTGGACTATACTCAGCGAAAATCCAGTTCAAAGGCACCAGGCTTACTCCGGAAGTTA
TTTTCGAAACAAGGTTCTGTTGCTAAAAGTAAAAAATAG