Microarray Probes on PGSC0003DMT400045470
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33571_PI426222305 |
JHI_St_60k_v1 |
CTAAGTACTACTAGTTTGACTATATGAGGTGCCTTTTGACTCTTTATTAGCTTTGTTCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045470
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045470 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01470.1 |
+3 |
1e-39 |
147 |
77/136 (57%) |
homeobox 1 | chr3:182648-184034 REVERSE LENGTH=272 |
Transcript Sequence (1935 bp)
>PGSC0003DMT400045470 1935 pgsc_dm_v3.4
GATAAATGAACGCTACATGGTTTAGTTTACTTGAATTGAAGTGAAGAAACTTAGTGTATT
CAAGATTTTGATACATTAGTGACCTTGTTCTTTTCTTGATTTGCTCTGTTTTAGGTTCTG
CATCAATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTCACTAAAGAGAGGCCATTTT
TCCCTGCAATTGACAACGAAGAAACTAGCAATGATGATTATGATAGTTGTTATCATCAGC
CAGAAAAGAAGAGAAGACTTTTGCCTAATCAAGTGCAGTTTCTTGAGAAGAGTTTTGAGG
TAGACAACAAGCTTGAACCAGAGAGGAAAGTTCAATTGGCTAATGAACTTGGCTTGCAGC
CTAGGCAAATTGCTATTTGGTTTCAAAATAGGCGTGCTCGATACAAGACTAAAGTACTTG
AGAAGGACTATGATGTTTTGAAAGCTAGCTTTGATAAACTTAAAGCTGATTATGACACCC
TTTTCAAAGAGAATGAGGATTTGAGAAATGAGGTATCTTGATCATACTTCTTGTAAAACC
AGCATTCTTCATTAGCATTAGAACTTCCAAGGGGTTTGTTATGTAGCCTTGAAGAAATGA
GTTGTTGTCCCTTACATGGTCTTGAACTTTATTTGGTATTAGAGTCAGACTCATCCGTAT
TGTTGATTTGTCCAACCTAGTTGTGTCGGGGTGTTAAAAGTTGAGGAAATAGATTGTTGT
CTTGTTAATGGTCTTTGAACAATCTCTCACCTGAGGAGCTAGCTTCTGGGATTAAGTTAG
GCTTCAATGTCATTTCCTTAACTTGGTATTAGAGTCAAACTCATCCGTATTCTTGGTTCA
TCCATAGGCACGCCGGAGTGTTAAAAGTTAAGCGAATAGCTTGTTGTCTCCTTAATGATC
TTTGAACAATCCTCGTCCGAGAGGCTAGTTCTGAGAGTAAGTTAGGGCTCACCTTTATTT
TCTTAACATGGTATTAGAGTCGGACTCATCCGTATTCTTGGTTTATCCGTAGGCGTGTCA
GAGTGTTATAAGTTAAGCGAATAGCTTGTTGTCTCCCTACTGGTCTTTCAACAATCTTCA
CCTCTAGAGATAGCTTCTGGGGTTGAGTTGAGTTACGCATAACGTCCATTTTCTTAGCGG
GATTTCTAATATATTCTTTGATTTTGTTGAATAGGTCCATTTGCTTACACAAAAATTGCA
TAGGAAGGAGAAAGGGAAGGAAAACTCAGAACAAAGTGTACCAATTAGTCCAATAGATAC
ACAAGAGGCTCAAAAGACAACAACTCCAATAGTTGTTACCTCAGATGTACCAAGTATACC
AAAGTTAATGTGCAAACAAGAAGATGCAACTTCAGCAAAAAGTGATGTTATTGATTCAAA
TAGCCCACATTATACTGATGGGAATCATTCATCAAATGTATTTGAACAAGAGCCATCTGA
TTTTTCTCAAGATGAAGATGACAATCTAAGCAAGAGCTTTTTATGTTTCCCAGAAATTGG
AGATCAAATTCAAGCTAATTCATGCAATTTGAGTTTCCAAATTGAAGATCAGCCTTGTTG
GTTCTGGCAATATTGAGTTATTAGGTTTCAAGATTGGCTCAATCCTACTTTAGTGTTCCA
AAGCAATCAGTATAATTTCACAAATGGAGTCTGAAGACAATTGTGTGTACACATGCACGT
ACATAGTCTTATCTCTATCTTGTGGTACAGGTAGAGAGACTATTTCCGATAGACCCTCGT
ACGAATTTAGAGGTCCAAGGCATTTGCTAAATTTCTTTGAACAATAATATGTTGTACATA
GGATTACTAAGTACTACTAGTTTGACTATATGAGGTGCCTTTTGACTCTTTATTAGCTTT
GTTCCAAAAAAAGTTGTGATTGGCCTTTTTTTTTCACTTTAGCTAAAACACAAATGGTAC
TATTGCCTTTTTTTC
