Microarray Probes on PGSC0003DMT400045466
Probe ID | Chip | Probe Sequence |
---|
CUST_33476_PI426222305 |
JHI_St_60k_v1 |
GGGTTATGCTGATGTTCATGAACTTCATGACATGAAGTATTAAGGAATTTGTGCTTAACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045466
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045466 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G69870.1 |
+2 |
0.0 |
664 |
339/603 (56%) |
nitrate transporter 1.7 | chr1:26316208-26320097 FORWARD LENGTH=620 |
Transcript Sequence (2091 bp)
>PGSC0003DMT400045466 2091 pgsc_dm_v3.4
AGAAAATATCGTACTAGTGTAGTTATATATATATTTATATAACTCCTAGCTAGTTATAAG
AAAAAAAAAACACATAATAAGGAGAAAATAAAGATATAGTACTATATATTATATCATTAT
GGAGGACAAAAAAAATAACAAGTCTTCAATGTCCTCTCCCTTGCCGGAAAATGGTGTCTC
CGACGAGGAAAAGCAGACCTCCGGTAGTGATTCTCCGTCCAAAGCACGCCAGAGAAAGCC
CGGTGGATGGAGAGCTATGCCTTATGTTCTAGGAAATGAGACATTTGAGAGATTGGCATC
AATAGGGTTGTTGGCAAATTTTATGCAATTTTTATTAGAAGTGTTTCATTTGGACCAAGT
TTCTGCCTCCAATGTTCTTAATATATGGGGTGGCGTTACTAATTTCCTACCATTACTTGG
TGCTTTTATTTGCGATGCATATATTGGTCGATTTTGGACTATTGCTTTTGCCTCCGTTTT
CGAAATGATGGGAATGTTGGCATTAACCATGATACCTTGGTTACCTAAGCTACACCCTCC
TCCTTGCAAAATGGGCCAACATGAATGCAAGAAGCCCAACAATTCACAAATGGGCTTTCT
AGCAATGGGCCTAGGATTTTTATCCATTGGATCTGCTGGAATAAGGCCTTGTAGTATCCC
ATTTGGTGTAGACCAATTTGATTCAACAACAGATGAAGGAAGAAAAGGAATTGCTAGTTT
CTTTAACTGGTATTACACTTCATTTACATTGGTTTTGATAATTGCAGTTACAGTTGTGGT
GTATATTCAAGATTCTGTGAGCTGGGTACTCGGATTTGGTATCCCTACGATACTCATTTT
CTTGTCTATCATTTTATTTTTCATCGGGACAAAAGTGTACGTTTATGTCAAGCCTCAAGG
AAGCATTTTCTCGAGCTTCATTCAAGTTTTTGTTGCGTCTTACAAGAAACGCAAGCTGAG
GCTTCCTGATGAACGTGAGAGTAACGGGGTCTTTTATGATCCTTTGTTACCTGAAGGGTC
CATTGTGAAGAAACTCCATCTAACCCATAAGTACAGGTGGTTGAACAAAGCAGCTATAGT
GATGGAGGATGAAGTTAACACAGATGGTACTTGTACAAACAAATGGAGACTATGCAGTAT
CCAGCAAATCGAAGAACTGAAATGCATACTCAAAATAATCCCAATTTGGTCAGCAGGAAT
TATATGTTTCACAGCGATGGCACAACAGGGCACATTCACAATCTCACAAGCTCTAAAAAT
GGATCGTCACCTCGGCCCTAATTTCCAGATCCCACCAGGTTCCCTTTCTGTAATATCGAT
GATCACAGTAGGAATATGGTTACCAGTCTACGATCGATTCATCATGCCATCTGTTACAAA
AATAACACGAATCGAAGGTGGGATCACATTGTTACAGAGAATTGGAATTGGGATGGTTTT
TTCAATTTTATCAATGGTTGTAGCAGGGATAACTGAAAAGATAAGAAGAAATTCCGCGAT
AACTCATAATAGTCCTGATGGGATTGCACCTGTTACAGTCATGTGGTTAGCTCCACAACT
AGTATTAATGGGATTCGCGGAGGCTTTTAACATACTTGGACAGATCGAGTTTTACAATAA
GGAATTCCCTGAAAATATGAGCAGTGTGGCTAATTCTCTGTTTTCTTGCACAGTTGCTGG
TGCAAGTTATATAAGCAGTTTACTAGTGAACCTTTTGCATAATACTACAGGAGGGCATGG
ACATCCAGATTGGTTAACGAATGATATTAATGAGGGTCGGGTAGACAATTACTACTATCT
TATCGCGGGGTTAGGTGTGTTGAATTTGTTCTATTTTCTATACGTTGCTCGTCGATATCA
GTATAAGACTAGAGTAATTGTTGATGATGGAATCAAGGGTTATGCTGATGTTCATGAACT
TCATGACATGAAGTATTAAGGAATTTGTGCTTAACTAAGTTCATAATCTGTAACTAGTAT
TTGATTAGCATATATTAGTGGTACTTACTTGATTATAGATAAGAGTTGTATGTATAAATA
TGAGAATAAAGGAGGGAAATTATTAATCTACTTAATGAAAAGTAAGATATG