Microarray Probes on PGSC0003DMT400044889

Probe IDChipProbe Sequence
CUST_34234_PI426222305 JHI_St_60k_v1 TATAGATGTCAAAGATATTGAGGAATGTATTGTCAAGGGGGACTGTAAGAAGTTAGCTGA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044889

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Source Transcript PGSC0003DMT400044889 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G12680.1 +1 0.0 637 357/569 (63%) unknown protein; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:7475104-7478174 FORWARD LENGTH=575

Transcript Sequence (1692 bp)

>PGSC0003DMT400044889 1692 pgsc_dm_v3.4
ATGGAAGTACCAGTAGGGTTCTTGGCTAAGCTTTGGAGCTTTATATCTTTTCTTCCTTTC
TTCTTCTTGCTCTTCCTTCTTGGTCTTCTCAAAGGATTAGTAATTGGCCCCGTTGTGACT
GTCCTCATATCAGTTGGGAATTCAGCAGTTGTAATTGGGCTATGGCCTGCACATTTAATC
TGGACTTACTATTGTGTAGCAAAAAGCAAGAGACTTGGATGGGTTTTGAAGATTGCATTA
CTGGTTTCATTGCCAGTTCCTCTGATTCTTTGGCCCATAGTAGCCATTATTGGGAGTCTT
CTAGGTGGGATAGGGTACGGTTTTTTCGCTCCTTTGATAGCAACTTTCGAGGCTATTGGA
GAGAGTATCACTTGCAAGATCTATCACTGCTTCACGGATGGTTGTATTTCCACTCTTAAA
AGGAGCTGCACGGTAGTTCGAGACTTTACAGACTTTTGCTTCCACTCTTATTTTTCTTAT
ATGGACGAGCTTTCTGAGGAAATATATCCAGATGAGAAACCAATAGAAGTGAAGTTGTCA
AAGCTGCCAAGTTGCATTTTGGTTTCTCTGCTTGCGATTCCAGTGGATGTCCCTCTTATT
ACAGCTCTTGCTCTTTGGAAGAGCCCATTCATGCTGTTCAGGGGCTGGAAGAGGCTACTA
GAAGACTTAATTGGGAGAGAAGGCCCATTTCTGGAGACTGTTTGTGTACCTTTTGCTGGC
CTTGCAATCTTTTTGTGGCCTTTAGCTGTTGTTGGATCCGTGGTAGCGTCCTTCTTTTCA
AGTTTTGCTCTTGCACTTTACAGCGGGGTTGTGGTTCATCAGGAAGACTCGTTTCGCATG
GGACTTGCATACATCCTAGCAGCCGTTTCCATATTTGACGAATACACAAACGACCTACTT
GACATGAGGGAAGGGTCATGCTTCATGAGGCCTAAATATAGAAGAAATATGATCTCCTCT
GGAGGCCTTGACAGTAAGAAGTTAATTGAGCAGAGGAAGGAAAAAGAAAAAGAAGGATCA
CGCAGTTTGAAGCTTGTTTCGCATGGATCACGAACGCTGAAACAGGCAATCCAACAATAT
ACGCCCATGCAGGTATGGGGTTGGCTCTTTAAATCCTGTGAGGTCAATGGCAGAATACTC
CTGCGTGAAGGCTTTATAGATGTCAAAGATATTGAGGAATGTATTGTCAAGGGGGACTGT
AAGAAGTTAGCTGATGAAGTGGAACTGACAAAGTCTAACTGGCCAAAGGATAAAGTGTTT
GAGTGGTTCCTTGCGCCTCTCTTAGTCATTAAGGAGCAAATAAAAACACTACAATTAGGA
GAAGATGAGGAAATTAGTCTGAGGAAGTTGATAATGTGTTACAAAAATGAAAGGCCAGAG
GAATGGGACAACACCGGATTTCCATCCACCGATACTGTGAGGAGAGCACAGTTGCAAGCT
GTTATTAGGAGGTTGCAGGGCATTGTTGGTTCATTTTCTCGGGTACCGACATTCAGAAGA
CGCTTCAAGAATTTGGTGAAGGTGTTGTATTTGGAAGCAATCCAGACTGGTCTTATTGCC
GAAACTGATGGTGGAAGCTCAAAAGCTGGAAATAGAAATAGGCATCAACGTGTAAAGGGG
GATAAGAACAATACAGATGATGACGGAGAGCAAAACGAGCAAAGCAGCCGAGATGGTGAT
AGTATTGTGTGA