Microarray Probes on PGSC0003DMT400044674
Probe ID | Chip | Probe Sequence |
---|
CUST_19026_PI426222305 |
JHI_St_60k_v1 |
GGATAAGCCAAATTAGTGTTAAGAGTTCTCTGTATTCCTTCATTTCTCTTCTTCTCTGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044674
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044674 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G78830.1 |
+3 |
3e-34 |
134 |
111/342 (32%) |
Curculin-like (mannose-binding) lectin family protein | chr1:29637141-29638508 REVERSE LENGTH=455 |
Transcript Sequence (1657 bp)
>PGSC0003DMT400044674 1657 pgsc_dm_v3.4
TTTTAACTCATCTTCCTCTAGTGTTCTTAATGGCTTTATGCAAGATTATTCCTTTTGCCT
TCATCCTTCTTTGTTGTTCTTGTTATCTGATATCGGGCCAACGTTTCGATTACCCCACTG
CAAATCTTTCTACAACTTGGATCAACAGTGTTTCTGCACCCCATTCAGTGGATTTCACTG
ATGGCTCAAGAGTAAGGGCTATACTACTCAGAGGAACTTTTGGTCCAAAATATGCTTGTG
GTTTCTACTGTAATGGCAATTGTGATACTTACCTCTTTGCCATTTTCATTGTGCAAACTA
ATAGCGCGTCCCAAATTACTTCTCCCGCGATTGGATTCCCACAAGTTGTTTGGTCTGCTA
ACCGGAACAATCCGGTTAAGATCAATTCAACTTTGCAGCTTACAGCACAAGGAGACTTGG
TGCTCAGAAATGCTGATGGTACTTTGGCTTGGTCAACTAACACTGCTGGCAAATCTGTTG
CTGGTTTAAGCTTGACCGATGAAGGGAATCTTGTTCTGTTTGATTTGAAGAATGCAACTG
TTTGGCAATCGTTTGATCACCCGACAGATGCTTTAGTTCCAGGGCAGAAGTTAGTATCCG
GGATGAAACTAACAGCAAGTGTTTCAACAACAAACTGGACCAAAGGAGGTTTGTTTTCCC
TCTCTGCTATCGATAATGGTTTGGTTGCTTTCATAGAGTCAAATCCTCCCCAAACATACT
TTGACGCGACTATTGGTGGATTGGATCCTAGTGGAGGATCCAATTATGTTAAGTATTTGG
ATGGAAGCTTAACTTTCTTCACAAATTCGAGTGGTACAACCGAGTTGGTTCTGGTTTCTA
TTACTCCAGCATCCTCTGCTCAGTATATGAAACTCGAGTCCAACGGACACTTGAAAGTGT
ACGAGTGGAAAAATCGATGGGGAGAGGTGGATGATCTCTTGACAGGCTTTCGTGGTGTGT
GCAATTACCCCACAGTCTGTGGAAGATATGGCATTTGCACAATGGGACAATGTAGTTGTC
CCATAAGCTCTAATTCAACTACCTATTTCAGACCGATAAACGTTAGGCTGCCTAATCTTG
GTTGCTCTGAGGCCAAAAAGCTAACTTGTAACAACTTAAAGAAACACAGACTTTTGGAAG
TTGAAGATGTGGACTATTTCGCATTTACTGCAGATATTAGTAACACAGATGTGAATACTT
GTAAACGCGCATGTTTGAATAAATGTTCCTGTAAAGCTGCATTCTTTCGTAGTGGTTTAA
ATTCTTCCAGGGCCATAGGGGAATGCTACTTACCAACTGAGATCTTTTCACTAATGAATA
ATGAGAAGGACAAGACAAGGTATGACTCTGTCGCGTTTATAAAAGTACAGGTTTAAGCTA
AACCAGCTGCTGCAATAGGGAAAAAATCGTGTTTTATGTACAAAAATGAATCTATGGGAG
GACATGGATGGAAACTTAGCAAATTATGCACGGGATCTTGAATAAGTTCATGCTAGACAT
GAACTATATGAAGGTATTATTACATAAATAAATGGTTGGATAAGCCAAATTAGTGTTAAG
AGTTCTCTGTATTCCTTCATTTCTCTTCTTCTCTGTATTACACTTTCATTTCTGTTTGTT
ATCTGTAATTTCAATTCAATAGACAATAATAAAGACA