Microarray Probes on PGSC0003DMT400044672
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19018_PI426222305 |
JHI_St_60k_v1 |
TATATCAGTTTTGCAGATTCAACTCCTTTATTGCCTTCGATCCTATCAGGTCCAAGGTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044672
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044672 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G32300.1 |
+1 |
2e-113 |
362 |
236/635 (37%) |
S-domain-2 5 | chr4:15599970-15602435 FORWARD LENGTH=821 |
Transcript Sequence (1926 bp)
>PGSC0003DMT400044672 1926 pgsc_dm_v3.4
ATGAAGCTAACAGCAAGTGTTTCAACAACAAATTGGACTGAGAGAGGTTTGTTTTCTCTC
TCTTTTACCGATGATGGTTTTGTTGCTTTGGTAGAGTCAAATCCTCCCCAAACATACTTT
GACGTGACTATTGGAAGATTGAATGCAAGTAGAGGCTCAAATTATGTTGTGTATTTGAAT
GGTAGTCTAGCTTTACTCTCAAACTCTAGTAATTCCAGCAATTCACAGACACTGGTTTCA
TTTAGTCTAGCGACCTCAGCTCAATATATGAGACTGGAGTCTGATGGACACTTGAAAGTG
TATGAGTGGCAAAGTGGGTGGACTGAGATGGATGATCTCCTCACAGGTTTTAACGGCGAG
TGTTATTACCCCATGGCCTGTGGAAGATATGGCATTTGCTCAAGGGGGCAGTGCAGTTGT
CCCAAATCGAGCTCTAATTCAACGACCTATTTCAGACAGATAGATGATAGGCAGGGTAAT
CTGGGTTGCTCTGAGGTCACAAGGCTGACATGTAATGCTTCAAGTAACCACAGATTTTTG
GATCTTCAAGATGTGGACTATTTCACGTTTACGACAGATATCAGAAACACTAGTATGAAT
ACCTGTAAAGATGCATGTTTGAGGAACTGTTCCTGTAAAGCTGCTTTGTTTCGCAGTGGT
TTAAACTCATCCACGGGAGACTGCTACCTACCATCCGAGATCTTTTCACTAGCGAATAAT
GAGAAGGACAAGACAAGGTATGATTCCCATGCATTTATAAAAGTACAGGTTGAACCTGAA
ATAGCTGCTGCTAAAGAGAAAAGGCGTGTTAATGGTGCTATACTGGGCTCTGTTATAGGA
GTTTCCATCTTAGGGATCATAGTTGGAATTGCAGTTTTCATATTCTGGAAGAAGAAGAGA
AAGGCCAATGAAGATGAGGAGGATTATCTAGATCACGTACCAGGAATGCCGACTAGATTT
TCATACGATGATCTAAAGGCTGCAACGGAGAACTTCACCAAGAAGCTTGGTCAAGGAGGA
TTTGGGTCAGTTTTTGAAGGGTGCTTAGCAGATGGCACAAAGATTGCAGTGAAATGTCTT
GATGGAATAGGACAAGTCAAAGCGTCATTCTTAGCTGAGGTTGAAACTATTGGCAGCATA
CATCATGTAAACTTGGTGCAATTGATTGGCTTCTGCGCTGAGAAATCTCATAGGCTTTTA
GTATACGAGTGCATGAGCAACGGATCACTAGAAAAATGGATCTACCATGGGAAACAGGAG
CAAACTCTAGATTGGAACTGCAGGAGGAAGATTATTCAAGACATAGCCAAAGGATTAGCC
TACCTTCACGAAGAATGCAGGCAAAAGATTCTGCATTTGGATATTAAGCCCCCAAACATA
CTATTGGATGAGAAGTACAACGCTAAACTTGCTGACTTTGGGCTTTCAAAGCTAATTGAT
CGGAATCAGAGCCAAGTTATGACTCAGATGAGAGGCACTCCTGGTTATTTGGCTCCTGAA
TGGCTTAGTGGAGTCATAACAGAGAAGGTAGATGTCTACAGCTTTGGCATTGTGCTCTTG
GAAATTTTGAGTGGAAGAAGACATTTTGAAGCATCGGAGTCTGAAGACCAACAGGTAATG
GTGAACTTATTCAGGAGAAAGGCAGAGGAAGGGAAGTTGGTGGATCTTATTGATAAGCAC
AGTGAAGATATGCAGTTTTACAAAGAAGAAGTAGTAAAGGCGATGCAGATTGCTGCCTGG
TGTTTACAAAGCGATTTCACGAAGAGGCCATCAATGTCGATGGTGGTCAAGGCCATGGAG
GGTGTTATAGATGTTGACAAGGATCTAGACTACAGCTTTAGACCACAAACTGTTTCCGCA
ATACCATATATCAGTTTTGCAGATTCAACTCCTTTATTGCCTTCGATCCTATCAGGTCCA
AGGTGA
