Microarray Probes on PGSC0003DMT400044601
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18898_PI426222305 |
JHI_St_60k_v1 |
CCCAATTCATCAAGGGGTTAGTTTAAACATCAGGTACGAATAAGTTCTTACCCTTGAGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044601
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044601 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G30950.1 |
+1 |
0.0 |
990 |
590/685 (86%) |
FtsH extracellular protease family | chr2:13174692-13177064 FORWARD LENGTH=695 |
Transcript Sequence (2620 bp)
>PGSC0003DMT400044601 2620 pgsc_dm_v3.4
GAAAATCTGCCATGAAAATCCAAAAACATTCTCAGAAAATATATCTCAGAATCATCCATT
GAGATAAAGCCACGTACCCAAATCCCAAGCCACATCTGTAACCTCTAAATTAACCTTACG
ACTCATCTTCTTCATCATCATCTTCTTCCCTTACAACCCTTTCTGTTACTGAGTAATCTT
CCCTCTTTCAACTTATCAGATTTATCATTAGAAGTGAACTGTGCAGGTTCTTGCTTCTTT
TCTGAGTGTATCAACATGGCTACTTCATCAGTATGCATAGCAGGAAATGATTTGTTTACC
CATAGAACACAGAAAGTTTTTAGGAAGGAGATCTATGGCAGAAAAATTTCATACTCCTCA
AATCTTCCATCATCTAGAAAAACATCAAGAGTAGTTGTAAAAGCATCCCTTCAGCAAGGG
CCACATGAAGGAAGAAGAGGCTTTCTCAAATTATTGCTTGGAAATGTTGGGCTTGGAGTG
CCTGCTTTGTTAGGTAATGGGAAAGCCTATGCTGATGAGCAAGGTGTTTCTAACTCAAGG
ATGTCTTATTCTAGATTTTTGGAGTATCTGGACAAGGATAGGGTGCAAAAAGTAGATTTG
TTTGAAAACGGAACCATAGCTATTGTAGAAGCTGTATCTCCAGAATTGGGAAACCGGGTG
CAAAGAGTTAGGGTACAACTACCTGGACTCAGCCAGGAACTCCTTCAAAAGTTCCGGGAA
AAGAACATTGATTTTGCTGCTCACAATGCTCAAGAGGACTCAGGTTCTCTCATATTCAAC
TTGATTGGAAATCTGGCTTTCCCGCTTATTTTGATTGGTGGTCTTTTCCTGCTATCAAGG
CGGTCTAACGGAGGAATGGGAGGTCCTGGTGGGCCTGGTAACCCACTAGCATTTGGTCAA
TCAAAGGCTAAGTTCCAAATGGAGCCAAACACTGGTGTGACATTTGATGATGTTGCTGGT
GTAGATGAAGCAAAACAAGATTTTATGGAGGTCGTAGAATTTTTGAAGAAACCTGAGAGA
TTTACTGCAGTGGGGGCTCGTATTCCAAAAGGTGTTCTTCTTGTTGGTCCTCCTGGTACT
GGGAAAACCTTGCTAGCAAAGGCAATTGCTGGTGAAGCAGGTGTTCCATTTTTCTCAATT
TCAGGCTCAGAATTCGTTGAGATGTTTGTTGGTGTTGGAGCCTCTCGAGTCCGTGATCTT
TTCAAGAAGGCCAAGGAAAATGCTCCTTGCATTGTATTTGTTGATGAAATTGATGCTGTT
GGGCGGCAAAGAGGGACTGGAATTGGAGGAGGAAATGATGAAAGGGAACAGACCCTGAAC
CAACTATTGACTGAAATGGATGGTTTCGAAGGAAATACTGGTATAATAGTTGTTGCGGCA
ACCAATCGTGCAGATATTCTTGACTCTGCTTTGCTGAGGCCAGGACGATTTGATAGACAA
GTATCCGTGGATGTTCCAGACATCAAGGGAAGAACAGAGATCTTAAAGGTTCATGCCGGC
AACAAGAAGTTTGATTCAGATGTGTCTCTTGAAGTCATAGCCATGAGGACACCTGGTTTC
AGTGGAGCAGATCTTGCTAACCTCTTAAATGAAGCAGCCATTCTTGCAGGTCGACGTGGT
AAGACAGCAATCGCATCCAAAGAGATTGATGATTCAATTGATAGGATAGTGGCTGGTATG
GAAGGAACAGTCATGACTGATGGCAAGAGCAAGAGTCTGGTGGCATATCATGAAGTTGGA
CATGCCATCTGTGGAACTCTCACTCCAGGGCATGATGCTGTACAAAAGGTCACTCTAATC
CCACGTGGTCAGGCAAAAGGTTTGACCTGGTTCATTCCTGCAGATGACCCAACCTTAATA
TCCAAGCAGCAACTCTTTGCTAGAATTGTTGGTGGACTTGGTGGAAGAGCTGCAGAAGAA
GTGATCTTTGGTGAACCTGAAGTGACCACTGGTGCTGCTGGTGATTTGCAGCAGATCACT
GGTTTGGCAAAACAGATGGTTGTCACTTTTGGGATGTCTGAACTTGGCCCATGGTCACTC
ATGGATACTTCAGCCCAAAGTGGTGATGTAATCATGAGAATGATGGCCAGGAACTCAATG
TCAGAAAAGCTAGCTGAAGACATTGATGTTGCTGTGAAGAAGCTTTCAGACAGAGCATAT
GAGATTGCATTGAGCCAAATCCGCAGCAACCGTGAAGCAATTGATAAGATTGTGGAAGTC
CTTCTTGAAAAGGAGACGATGACTGGAGATGAATTCCGTGCTATTCTCTCAGAATTTGTT
GAAATTCCTGCTGAAAACCGCGTCCCTGCTGCTGTACCTACCCCAGCAGCTGTATAATAG
CTTGAACATATACTGCAACTTGTACAATTCATATACACTTATCCACCTAATTGATCTAGA
GTATAAACAATAGACTATAAGAAAGTTAAAACACTTTTGTGCATTTGTGTTGGAAGCAAT
TTTTCACATTTGAAATAGAATTAGTCTTTTCTTCATTGTAATGCTATGAGTTGTTTCCCT
TGCTTTGAGCATTACTCAGTGCACAAACTCCTTGTCACGACCCAATTCATCAAGGGGTTA
GTTTAAACATCAGGTACGAATAAGTTCTTACCCTTGAGCC
