Microarray Probes on PGSC0003DMT400044521
Probe ID | Chip | Probe Sequence |
---|
CUST_19051_PI426222305 |
JHI_St_60k_v1 |
TATTGTACGTGGTGGTGCAGCTACTGAATTCAAACCAGATGAACTGTTCTTGGATCTTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044521
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044521 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G32300.1 |
+3 |
2e-101 |
335 |
189/434 (44%) |
S-domain-2 5 | chr4:15599970-15602435 FORWARD LENGTH=821 |
Transcript Sequence (2404 bp)
>PGSC0003DMT400044521 2404 pgsc_dm_v3.4
AAAAAAGGCACAACAGAAAGAACTCATATATTTTAGAAAAATATGTTTGTAGAAAAGAGA
CTGTATTTTCCTATCCTTCTCTTCATTTACCTTCTCTTTTGTTCGTCTCGATTTACTATA
TCACAATCTTTACAGGACAACAAGATCAGTCTTTCAAATTCTACAGCAGGGCTTGCCGGG
CCTCTGTTGTTCGTCTCGATTTGCTATATCGCAACCTTTACAGGACTACAACATCACTCT
TTCGAATTCTACTGCAGGGCTTGCCGGGCTTTCCTCTTTCTGGATCAACAGGCCCTCTCT
TCTTGTTAATTCCACCGAGGACTTCTTTGGTTTCGTGACACCCATACTTCAGCGAAAAAA
TGCTGGCTCACGATTCCTCTGTGGCTTCTACTGCAATTACAATGCCACAGAATGCCTTCT
TGGTATCCTTTTGTACCACAACGAGAACAATATGATAGATAAACCCCAGTTAGTTTGGTC
TGCTAACAGGAACCATCCAGTGAAATTCAATGCAACCTTGCAACTAGGCCATGATGGCAA
CTTGGTCTTGACAGACTCCGATGGCACTCTTGTTTGGTCCACTGATACAATTGGGAAATC
TGTTTCTGGCTTAAACTTGACAGAAATGGGAAATCTTGTTCTCTTTGATAAGAGAAAGCG
CACAATTTGGCAGTCTTTTGATCATCCTACAGACTCTTTGCTTCCAGGGCAGAATTTGGT
TTCCGGGCAGAAGCTCATAGCAAGCGTTTCAGCAACCAATCGGAGTCAAGAAAAAGTTGG
AAGATTGCAAAAGGGCCTGTCTGAGTAACTGTTCTTGCAAAGCTGCTGTTTTTGAATATA
ATTGGAATGGGGCTCGAAGAGGGAACTGTTTGTTACTGAATGAAGTTTTCTCTCTCACAG
ACAGCGAAGAAGGAAGAGGCAAGACAGTATTTATTAAGGTGCAAAATACCTCAGAGGCGC
AGACTCGGTCTCTAATCATTCCTGGAGGAAAGAAATCAAGACCTTTCAAAGTGATAATAG
GATCTACTCTTGCAGCTTTCTTCGGGATAATTTTAAGCATAGCTACTTGCTTTGTTATTT
TCAGAAAGAGGGCACATGAGTCCAGAAAGGCTGCGGATATTTTGGATTTAGCACCAATCT
TACCGGGAATTCTAACTCGATTCTCTTACAATGAACTGAAAATAACTACAGATGATTTCA
GTAGAAAGCTCGGGGAAGGAGGATTTGGCTGTGTTTATGAAGGAACACTGAGAAATGGAA
CTAAAATAGCTGTGAAGAATCTGGATGGTGTAGGTCAAGTAAAGGAATCATTCTTAACAG
AAGTAAAGGCAGTCGGTGGCATTCACCATATCAATCTTGTAAAACTCATTGGATTTTGTG
CCGAAAAAAGCCACAGGCTTCTAATCTATGAGTACATGGTGAATGGATCGCTGGATAGGT
GGATTACGCATGAAAATCAAGAAAATGGGCTTACATGGAACACAAGGCAGAGGATAATAT
CAGACATCGCCAAAGGGTTAGCATATCTACATGAGGATTGCAGCCATAAGATAATTCATT
TGGACATCAAACCACAAAACATCCTTCTAGATCAATATCTCAATGCTAAGATATCAGATT
TTGGGTTGTCGAAGCTAATTGAGAAAGACAAAAGCAAAGTTGTGACTAGAATGAGAGGAA
CACGGGGTTATTTAGCTCCTGAATGGTTGAGCTCGGTAATCACTGAGAAAGTTGATGTAT
ATGCTTTTGGAATTGTCCTCTTGGAAATTCTCTGTGGGCGAAAAAATTTGGATTGGTCCC
AAGCTGATGAAGAAGATGTACATTTGCTAAGTGTCTTTAGGCGAAAAGCGGAACAAGAGA
AGCTCATCGATATGGTTGACAAAAATGAGGATATGCAGCTCCACAGGGAAGCAGTGACAG
AAATGATGAGCCTTGCTGCATGGTGTCTACAGGGCGATTTTTCCAAGAGGCCTTCCATGT
CATTGGTGGTTAAGGCATTGGAAGGTTTGGTGACTGTTGAAACCAACTTGAATTATGATT
TCACACATGTACCTGAGGTTGGGGCAGGCAACCAAGAGAGGGAAGTCATTATCAGTTCAA
AATTTCCTTCAATTTTATCGGGACCAAGGTAAACAATATGCTTAAGATTTTGTCTTTGAA
GGAACCAACATATGGTTGCGTAATGTCAAATATCGCAACATTTTCAATTCTAGCATAACT
TTTTTACCGTGTATGAGATTATAATTCATGAAATGTAATGTTCAGTAACTTCTATATTAA
ATTTTTGAGCTTCATGTTACTATCATGTAGAGGCTTCTCAATCCATGTGCGAAAATAAGT
ATAATATTGTACGTGGTGGTGCAGCTACTGAATTCAAACCAGATGAACTGTTCTTGGATC
TTAA