Microarray Probes on PGSC0003DMT400043659
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38364_PI426222305 |
JHI_St_60k_v1 |
GTAGGATTTTTTGCAAGAAATAAGCGCACACAACTGTTGTCTGTTTTTCGAAAATCTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043659
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043659 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G02450.1 |
+1 |
3e-36 |
133 |
67/142 (47%) |
HSP20-like chaperones superfamily protein | chr4:1073987-1075765 REVERSE LENGTH=241 |
Transcript Sequence (1027 bp)
>PGSC0003DMT400043659 1027 pgsc_dm_v3.4
AGGCAATAGAAGTATCTAGAAATTTGCAACATCACACCTTCAAATTTCGAAACCTTCAGT
ATATAATCAAAACCTAGCAATTTCAAAACGGCACATACATACATCTGCTCTCTCAATTTT
CGTCTCCCCCAAAACACTAACAACATCATGAGCCGACATCCTACTATCAAGTGGGCCCAG
AGGTCTGACAAGGTGTTTATCACAGTTGAGTTACCTGATGCCAAGAATGTAAAGCAGAAA
CTAGAACCAGAAGGAAAATTCTCTTTTTCTGCAACTGCTGGAGCTGATAATGTTCCATAT
GAAGTCGTTCTTGATCTCTTTGATAAAATAGATGTCGATGAGAGCAAATCTAGTATTACA
TCTAGAAATATCTGCTATCTTGTAAAGAAGGCAGAAGACAACTGGTGGAGCAGACTGATT
AAGCAAGAAGGTAAATCGCCAACGTTTTTGAAAGCTGACTGGGACAAATGGATTGATGAA
GATGAACAGGACAGTGAACCAGCTGGAGCAGATATGGATATGGGTGACATCGACTTTTCG
CAACTCAACATGGGTGGTGGTCTAGGGGATTTTGATGCTGATGAGCCAGAAGAAGATGAA
AGTGACACTGAAGAGGAAATTGAGGAAGGAAAGCATGAACATAGTGAATCTCTAGCAGCA
ACTCCAGCAAGCACTGAAGTTGAGATAAAAGCTTAGAAGCTCTCCCTTTTTTTATGCTTT
TGTTTAACTTCTGATTATTAGTATAAGATATGTTGTTTGAACTAATGTGTCTTGACTATT
GGTGATGGAGCCTATGTTCTGGCTTTGTTATTCAGTGTCTATGCATTTGGGAATTTAACT
TGAGATAAAGTAGAACAATGGTATCATTCTTGGTTAAATGAAGTAATCTGTGATTTGAGG
GTCATGGGTTGAGTTTTATTCTCAAAATTTTCACTTGCCATAGACCGGTGACCTAAGTAG
GATTTTTTGCAAGAAATAAGCGCACACAACTGTTGTCTGTTTTTCGAAAATCTTGTTTTT
GTTAAAC
