Microarray Probes on PGSC0003DMT400043511
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49094_PI426222305 |
JHI_St_60k_v1 |
TCTCACATAAGTCAGACCTTGGACATGTCGTGCAGCTATTGATCGAAGCTATTGAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043511
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043511 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G19390.1 |
+2 |
1e-31 |
122 |
66/216 (31%) |
Uncharacterised protein family (UPF0114) | chr4:10574903-10576355 REVERSE LENGTH=273 |
Transcript Sequence (1247 bp)
>PGSC0003DMT400043511 1247 pgsc_dm_v3.4
AAAAAAAGTAAGAGAGAAAAATAAATAAAAGAAGGTGAAATTAATTAAAATGGCGGTAAA
TGGTAGATTGTTACGTACCTCTAAGCAAATGGGGTTACGTGACAACAATGGTGGCCAGAA
TCAGCAGCAGCAACGTTGTTATTCGTTGATGAATAATTATTCGTTAAAGTTTAAGTGTTT
AAACAAAGGTGGCCTTGTTGGCGGAGCAGAGAAGAAGACAGTAGCAACTAAGGCTGTTGG
TACTGCGGTTGTGTCTGAACCAATTACGACACAAAATTGGAAGATTTCAGATCTAAGTTT
AATCGCAGATAATAATGTATCAGATCTGATACTTCAAAACTTGAAAAATTTACTCAAACA
AATGCCGCAGAAATTGCATCACTTACAGTCTTCCATAGAGAAGGGTATTTTGGATTGCCG
GTTCTTCAGTCTTTTTGCAGTCGCAGGGACATTGATTGGTTCATTATTATGCTTTATCGA
GGTAATATATTAGTAGTACTAATTACTAGTATTATTATTTTATCATGAAGAAATAATTGA
TTTTATGCAATTTTAAGACTAACAAATTAAATAAATATTCTCATTATTGCAGGGCTGTTA
CTTAATCATAGAGTCATACGTCCACTATTTTATCGCACTCTCACATAAGTCAGACCTTGG
ACATGTCGTGCAGCTATTGATCGAAGCTATTGATATGTTTCTATTGGGGACTGCTATGCT
TACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAATGTTAAAAG
AGATGATCAAATGTCAGGCAAAAAGTTGTATTATTTTCAAACACTTCCATCATTGATGGG
AATGAAATCAGTAATGCAAGCCAAATCAAGAATAGGACATGCACTTATAATGTTACTTCA
AGTGGGAGTATTGGAGAAGTTCAAGAATATACCTGTAGTTAATGGATTGGATCTTGCTTG
TTTTGCTGCTGCTGTTTTTGTTTCCTCCATATGTGTCTTCATTCTTTCTAGGCTTGCTGT
CACTAACACAAAGGCTGGAAACTAAGATAATTCATTTGTAACCAAAAAAATAGGTCTGTA
TACTAGTCGAAAATTAGGACTTGTTATAGTTGACCTTATTATTAAATATTCTTTCAATTT
GTAACAATTAAAATACATTTGTTCATATCTGTTTTTGTATATTTTTCGAATCAGTAAATG
AGTTTCTGATATGGTCCCCAGTTATGGATCTAGTTATGAGACGCTGC
