Microarray Probes on PGSC0003DMT400043510
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49115_PI426222305 |
JHI_St_60k_v1 |
GAAAAATTTACTCAAACAAATGCCGCAGAAATTGCATCACTTACAGTCTTCCATAGAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043510
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043510 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G19390.1 |
+1 |
3e-29 |
87 |
39/113 (35%) |
Uncharacterised protein family (UPF0114) | chr4:10574903-10576355 REVERSE LENGTH=273 |
Transcript Sequence (1258 bp)
>PGSC0003DMT400043510 1258 pgsc_dm_v3.4
AAAAAAAGTAAGAGAGAAAAATAAATAAAAGAAGGTGAAATTAATTAAAATGGCGGTAAA
TGGTAGATTGTTACGTACCTCTAAGCAAATGGGGTTACGTGACAACAATGGTGGCCAGAA
TCAGCAGCAGCAACGTTGTTATTCGTTGATGAATAATTATTCGTTAAAGTTTAAGTGTTT
AAACAAAGGTGGCCTTGTTGGCGGAGCAGAGAAGAAGACAGTAGCAACTAAGGCTGTTGG
TACTGCGGTTGTGTCTGAACCAATTACGACACAAAATTGGAAGATTTCAGATCTAAGTTT
AATCGCAGATAATAATGTATCAGATCTGATACTTCAAAACTTGAAAAATTTACTCAAACA
AATGCCGCAGAAATTGCATCACTTACAGTCTTCCATAGAGAAGGGTATTTTGGATTGCCG
GTTCTTCAGTCTTTTTGCAGTCGCAGGGACATTGATTGGTTCATTATTATGCTTTATCGA
GGGCTGTTACTTAATCATAGAGTCATACGTCCACTATTTTATCGCACTCTCACATAAGTC
AGACCTTGGACATGTCGTGCAGCTATTGATCGAAGCTATTGGTACATTTTCCCTCTCTTA
AACGTTGAAATTAATAATCGAGAATTGAATGAACAAGTGTTTATATTATGAGCATAAAGA
AGTTAAACTGTAATTGAATAACGTTCTTTTTTTTTTTCTTCAGATATGTTTCTATTGGGG
ACTGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATT
AATGTTAAAAGAGATGATCAAATGTCAGGCAAAAAGTTGTATTATTTTCAAACACTTCCA
TCATTGATGGGAATGAAATCAGTAATGCAAGCCAAATCAAGAATAGGACATGCACTTATA
ATGTTACTTCAAGTGGGAGTATTGGAGAAGTTCAAGAATATACCTGTAGTTAATGGATTG
GATCTTGCTTGTTTTGCTGCTGCTGTTTTTGTTTCCTCCATATGTGTCTTCATTCTTTCT
AGGCTTGCTGTCACTAACACAAAGGCTGGAAACTAAGATAATTCATTTGTAACCAAAAAA
ATAGGTCTGTATACTAGTCGAAAATTAGGACTTGTTATAGTTGACCTTATTATTAAATAT
TCTTTCAATTTGTAACAATTAAAATACATTTGTTCATATCTGTTTTTGTATATTTTTCGA
ATCAGTAAATGAGTTTCTGATATGGTCCCCAGTTATGGATCTAGTTATGAGACGCTGC
