Microarray Probes on PGSC0003DMT400043495
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49106_PI426222305 |
JHI_St_60k_v1 |
GAGGAAGAGGCCGGTGATGTGTATAGTTTAGTATAGTAATTATTTTTTGTTGGAAAATGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043495
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043495 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G42650.1 |
+3 |
0.0 |
669 |
334/496 (67%) |
allene oxide synthase | chr5:17097803-17099359 REVERSE LENGTH=518 |
Transcript Sequence (2036 bp)
>PGSC0003DMT400043495 2036 pgsc_dm_v3.4
CTCGGCCCTACCTGGCTCCGCTAATTGATTGAGACCTCAAATGTCATCACCTTACTTTTG
ACATCACACACTTGTTTATTTATAGGCAAGAATACCCACAGAGATTTCTCATTCTCATTC
AACTATATTGAACTCCCCTTCTCTTGTTGAAGAAAAGTCAAGAGTTCAATTCTTGATTTC
TAACAGAAATGGCATCAACTTCTCTTGCTCTTCCTTCTCTTAAGCTACAATTCCCCTCAC
ATAAATCATCATCTTCTCGTAAAAATTCATCGTCTCATCGTGTTAGTATTCGTCCCATTC
AGGCTTCAGTGTCTGAGAGACCGCCATACATTTCATCACCATCACCATCACCATCGCCAC
CTGTTAAACAAGCAAAACTCCCAACCCGAAAAGTCCCTGGAGATTATGGACTGCCATTAG
TTGGTCCATGGAAAGACAGACTTGATTACTTTTACAATCAGGGCAAAAATGAGTTTTTCA
AATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCAT
TCATTTCATTCAATCCAAACGTTGTTGTTTTGCTCGATGGTAAAAGTTTTCCCATCCTTT
TTGATGTATCTAAGGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCCTCCACTG
ATCTCACAGGCGGTTATCGTGTTCTCTCCTATCTTGATCCTTCCGAACCAAACCATGCCA
AATTGAAGAAACTCATGTTTTATCTCCTTTCATCACGGCGCAATGAAGTTATTCCAGAGT
TTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGGA
AAGCCAGGCTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGATCCTTAT
ATGGCATTAATCCTCAAGACACCAAACTTGGAACCGATGGACCTAAGTTGATCGGCAAAT
GGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCGAAGGTTCTTGAAGACC
TTGTTATGCACACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGACTACCAGAGATTGT
ACAATTTCTTCTATGAAAACTCAACTTCCGTTCTTGATGAAGCAGAAAAAATTGGCATTT
CTCGCGAAGAAGCTTGTCACAATTTGCTATTCGCAACATGTTTCAATTCATTCGGAGGGA
TCAAAATCTTTTTCCCCAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACA
GCCAATTAGCTCAAGAAATTCGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGG
CTGCCATGGAAAAAATGCCATTAATGAAATCAGTAGTCTACGAATCCCTCAGAATTGAAC
CCCCAGTAGCATCACAATACGGCAGAGCAAAACACGACATGGTAATCGAATCCCACGACG
CATCATTCGAGATCAAAGAAGGTGAACTCCTTTATGGGTTTCAACCATTTGCAACCAAAG
ACCCAAAAATCTTCGACCGATCGGAAGAGTTCGTCGCCGATCGGTTCATCGGAGAAGAAG
GAGAGAAGCTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACAGAGAACCCATCGA
TAAATAACAAACAGTGTGCCGGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGTTGG
TCGAATTGTTCCTCCGATATGATTCGTTTGAGATTGAGGTCGGTGCATCTCCATTAGGAG
CTGCAATTACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGATTAACACTGGCTTAATTAA
GTAATTAGTAAACTTGTTTAGTGTATTATATTTCATTGTTATTAAGAAATAAGAATTTAC
AGAACAGAGCATGCCGGCCGGCGGCGGGGATTGAGGAAGAGGCCGGTGATGTGTATAGTT
TAGTATAGTAATTATTTTTTGTTGGAAAATGGAATGTGTAACTATTTTTACTCTTTTCAA
TGATCAATATTCAATGTAATATGTTATTCTCAATAAATACAATACTCCTTCGTATC
