Microarray Probes on PGSC0003DMT400043311
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27830_PI426222305 |
JHI_St_60k_v1 |
CTCACTCGGTCGATAAGCCTAAGAAATCAGATTCCGGCAAATCTAATCAACTCAAAAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043311
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043311 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G16770.1 |
+1 |
2e-43 |
153 |
118/271 (44%) |
ethylene-responsive element binding protein | chr3:5705784-5706768 FORWARD LENGTH=248 |
Transcript Sequence (1121 bp)
>PGSC0003DMT400043311 1121 pgsc_dm_v3.4
CAATTACTTTCACTCAAAAAAAAAAAAAAAGGAAAAAATTAAGAGTAACAAAAGATGTGT
GGAGGTGCCATAATCTCCGATTATGAGCCCGCCGGAAACTTCTACCGGAAACTCTCTGCT
CGTGACCTGTGGGCTGAGTTTGACCCTATCTCCGACTACTGGTCCTCTTCCTCCTCACCC
TCAACTGTCGGAAAACCTTATTCCGCTCAGTCGCCGGTGACTCACTCGGTCGATAAGCCT
AAGAAATCAGATTCCGGCAAATCTAATCAACTCAAAAAAGGTAATAAGACTGTGAAGGTT
GAGAAGGAGAAGAGTAGTGGACCAAGGCTGAGAAAGAACAAGTACAGAGGAATAAGGCAG
AGACCATGGGGAAAATGGGCTGCTGAGATTCGCGATCCTCAGAAGGGTGTCCGTGTTTGG
CTTGGTACATTCAACACAGCAGAGGATGCTGCCAGAGCCTATGATGAGGCTGCTAAGCGC
ATTCGTGGTGACAAGGCCAAACTCAACTTCCCCGTCCCATCACCACCTGCTAAGCGACAG
TGCACTAGCACTGTCGCTGCTGATCCTCCACCAGCATTACTCCTTGAGAGTTCTAACATA
ATATCCGATAACAACTCTCCTTTAATGAACTTCGGATATGATGTTCAGAGCCAAACTCCC
TACTACCCAATGGAAATGCCCGTTGCTAGTGATGATTATGAACTCAAGGAACAGATTTCC
AACTTGGAATCGTTCCTGGAATTGGAGCCAGCAGATTCATCTGATCAGTTTTCAGGGATC
GTCGATTCTGATCCTCTTAATGTTTTTCTGATGGAGGATTTTGCTTCAACTCAGCATCAG
TTCTATTGATCCTGAGTTGTTTGGTGAGTGATGAGTGACTAGTTTATTATCTTTTGGCTG
TAGTAGTAGTAATAGAGAAAAAAGTACATATGATATGATAATAATAAGTTGCGTGCCTTA
GCATGCAATTGTAATATTATCAATGTTTGTTGTCTTGTGTTGTTTATGCTTTCTAAATCT
TGGATTTACCTTATAATGTTTGGTCATTTGGTGCATGTATTGTAACTATATATGGAGTAC
TTTATTACTACTAGATAGCTGACACCTCTAGTTGATGGTAT
