Microarray Probes on PGSC0003DMT400043146
Probe ID | Chip | Probe Sequence |
---|
CUST_12218_PI426222305 |
JHI_St_60k_v1 |
TAATCTATTGGGATGGTGCAAGAGTTCTTGGAGTTTTGGCTATGTCTCGAGCAATCGGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043146
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043146 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G11410.1 |
+3 |
6e-143 |
422 |
233/406 (57%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (1662 bp)
>PGSC0003DMT400043146 1662 pgsc_dm_v3.4
ATTTCTTAATACTGCTTGTTTCGTCTTATTGTTTCCTTGAATTTATCAGTTGTTGATGAA
TTCGGTAAAGTTTTAGCGATTGGTTGATCAAACACACAAGAAGAAGAGTGAGTGTTTTAT
ACGATTTTCTTTTTAATTGCGGAATGTCTTTTGGTGAGACTAAAACTGTAACTCCAACTG
AACCGAGTACGGAAGCTGCAAGAAGGAGACGCATGGAAATTCATCAGTTTCGATTTGTTG
CCAGCGATATGGCGGTGGCTCCACCGACTAGTATGGAGAATGGAGGAAGGAAGAGACAGA
AATTGGAGAAAACTGTGTCGGTAAAAAGCTATGATAGTAAAGAGAAGAAGCGATTCAAGT
TGGAAAGAATTGTTTCCCTGCCACTATCGCTGCCGTGCACAAGTGAAATTGAGATGGGTA
AAAAGAAGTTAGCAGAGAATAAAGAAACCGAAACGAACGCTTTGGATTTGACGGAATCTG
CTTCTATATCGTTGAATATTGAACGCCAGGGAGTATCCGACTGTCCAAAATTCGGGATGA
CATCTGTATGTGGAAGGAGAAGAGATATGGAAGATACGGTGTCGATCTACCCGTCGTTTC
TTCAGGATAAACATGAAAAGTCCAGCAACTTACATTTCTTCGGTCTCTACGACGGCCACG
GCTGCTCTCATGCGGCGATGAAATGTAAAGATAGAATGCATGAGATAGTGAAGAACGAGG
TTGAGAGCGCAGGGGAAGCTACATGGAAAGAGATGATGAGTCAGAGCTTCTCAAAAATGG
ACAAAGAAGTCGTTGAATATTCGAAAGGAGCTGGAGGCACACATACTGTGGATTGTAGAT
GCGAACTTCAGACGCCGCAGTGCGATGCTGTTGGATCCACTGCTGTTGTGGCCGTCCTAA
CTCCAAACAAAATCGTCGTGTCCAACTGCGGTGATTCTCGCGCTGTGCTCTGCAGAAACG
GTATCCCAATTCCTCTGTCCACTGACCACAAGCCTGATCGACCCGATGAACTCAATCGGA
TTGAAGAAGCTGGCGGTCGTGTAATCTATTGGGATGGTGCAAGAGTTCTTGGAGTTTTGG
CTATGTCTCGAGCAATCGGTGACAGTTACTTAAAACCATATGTTACATCTGAACCGGAGG
TGACCATAACGGAGAGAACAGTAGAAGATGAGTGTTTGATATTAGCGAGCGACGGGCTAT
GGGATGTTGTCTCAAACGAGACAGCATGTGGTGTAGCTCGCATGTGCTTGCGATCTGGGC
AGAGCTCCGACCAGGCTTGCACTGATGCGTCAATCCTCTTGACAAGGCTGGCTTTGGCTC
GGCACAGTTCGGATAATGTTAGCGTTGTCGTCGTTGATTTGAAAGGAGGTCTATAAGGGA
TTGATTTAATTATAAGTTTTGCATGTACATGTACTTGTGTTTTTCTTTATAGGCAAGATT
TTCCACGGTTGGTTCCTGGGATGCAACTCTCCCAAGGAAGGGAAACTGCTTGAGCTGGAG
AGAGTCTGTTGTATTACTAAGTAGGTGTTCTGGACATCGGAAACAGATCGCCCTACTTTG
ATTTTTGCAGGCTTTGTTTTCTGCTCAATTGGTTTGTTTTTATTGTGTTAAAAGTTTTTG
CATATTTATTGGAGAAGAAACTTCTAAACGTAGGGATACAAA