Microarray Probes on PGSC0003DMT400043145
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12282_PI426222305 |
JHI_St_60k_v1 |
GTCTCGAGCAATCGGTAAGCATATTAGTAGTTAAATGGTCAATGAGGATAATTTAACTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043145
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043145 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G11410.1 |
+3 |
2e-93 |
296 |
179/375 (48%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (1856 bp)
>PGSC0003DMT400043145 1856 pgsc_dm_v3.4
ATTTCTTAATACTGCTTGTTTCGTCTTATTGTTTCCTTGAATTTATCAGTTGTTGATGAA
TTCGGTAAAGTTTTAGCGATTGGTTGATCAAACACACAAGAAGAAGAGTGAGTGTTTTAT
ACGATTTTCTTTTTAATTGCGGAATGTCTTTTGGTGAGACTAAAACTGTAACTCCAACTG
AACCGAGTACGGAAGCTGCAAGAAGGAGACGCATGGAAATTCATCAGTTTCGATTTGTTG
CCAGCGATATGGCGGTGGCTCCACCGACTAGTATGGAGAATGGAGGAAGGAAGAGACAGA
AATTGGAGAAAACTGTGTCGGTAAAAAGCTATGATAGTAAAGAGAAGAAGCGATTCAAGT
TGGAAAGAATTGTTTCCCTGCCACTATCGCTGCCGTGCACAAGTGAAATTGAGATGGGTA
AAAAGAAGTTAGCAGAGAATAAAGAAACCGAAACGAACGCTTTGGATTTGACGGAATCTG
CTTCTATATCGTTGAATATTGAACGCCAGGGAGTATCCGACTGTCCAAAATTCGGGATGA
CATCTGTATGTGGAAGGAGAAGAGATATGGAAGATACGGTGTCGATCTACCCGTCGTTTC
TTCAGGATAAACATGAAAAGTCCAGCAACTTACATTTCTTCGGTCTCTACGACGGCCACG
GCTGCTCTCATGCGGCGATGAAATGTAAAGATAGAATGCATGAGATAGTGAAGAACGAGG
TTGAGAGCGCAGGGGAAGCTACATGGAAAGAGATGATGAGTCAGAGCTTCTCAAAAATGG
ACAAAGAAGTCGTTGAATATTCGAAAGGAGCTGGAGGCACACATACTGTGGATTGTAGAT
GCGAACTTCAGACGCCGCAGTGCGATGCTGTTGGATCCACTGCTGTTGTGGCCGTCCTAA
CTCCAAACAAAATCGTCGTGTCCAACTGCGGTGATTCTCGCGCTGTGCTCTGCAGAAACG
GTATCCCAATTCCTCTGTCCACTGACCACAAGGTGTGTGCCAAATTAATTCCTAACATTC
TGTTTCTGTTGCTGGAGAGTGGTAAAAACAGTATTTCTAAATTAGTGTTTTGTTCCTGTT
TGTAGCCTGATCGACCCGATGAACTCAATCGGATTGAAGAAGCTGGCGGTCGTGTAATCT
ATTGGGATGGTGCAAGAGTTCTTGGAGTTTTGGCTATGTCTCGAGCAATCGGTAAGCATA
TTAGTAGTTAAATGGTCAATGAGGATAATTTAACTAGTTCAACTGATACCTGATTTGCCT
TAAACTTATATTATGTTTGGAACATTTTTCAGGTGACAGTTACTTAAAACCATATGTTAC
ATCTGAACCGGAGGTGACCATAACGGAGAGAACAGTAGAAGATGAGTGTTTGATATTAGC
GAGCGACGGGCTATGGGATGTTGTCTCAAACGAGACAGCATGTGGTGTAGCTCGCATGTG
CTTGCGATCTGGGCAGAGCTCCGACCAGGCTTGCACTGATGCGTCAATCCTCTTGACAAG
GCTGGCTTTGGCTCGGCACAGTTCGGATAATGTTAGCGTTGTCGTCGTTGATTTGAAAGG
AGGTCTATAAGGGATTGATTTAATTATAAGTTTTGCATGTACATGTACTTGTGTTTTTCT
TTATAGGCAAGATTTTCCACGGTTGGTTCCTGGGATGCAACTCTCCCAAGGAAGGGAAAC
TGCTTGAGCTGGAGAGAGTCTGTTGTATTACTAAGTAGGTGTTCTGGACATCGGAAACAG
ATCGCCCTACTTTGATTTTTGCAGGCTTTGTTTTCTGCTCAATTGGTTTGTTTTTATTGT
GTTAAAAGTTTTTGCATATTTATTGGAGAAGAAACTTCTAAACGTAGGGATACAAA
