Microarray Probes on PGSC0003DMT400043110

Probe IDChipProbe Sequence
CUST_18501_PI426222305 JHI_St_60k_v1 CGTTTGCAATGTAATATTTGGACCTCAGTTTGGTCAACTTACTGCATTCTTGCTATTAAA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043110

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Source Transcript PGSC0003DMT400043110 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G22190.1 +1 4e-44 160 159/361 (44%) unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). | chr4:11742102-11743265 REVERSE LENGTH=387

Transcript Sequence (1377 bp)

>PGSC0003DMT400043110 1377 pgsc_dm_v3.4
CAAATTTCATCTCTCCATCTTTATTAATTGTAGGGTCTTTCTCTTTCTTTTTCTTTCCTC
GTAAGAACACAAAGGAGAAAAGCATATAAAGAAAGAGTTATTTTTTGTTCTCTGCAAAAA
AAGTAGAGAATGGAAGATCCTGAAAGGCTTACATCATGCAACAGTGGAACAAGGAGAATT
AGCTCCGACTCTATCCATTCACCCGAATTCGAATTTTGGATGGTCCGAAACCCATCATTT
CCTCAGCCTAATCAGCTCTCTGCCGATGAGCTCTTCTCCGATGGCATCCTTCTCCCTTTA
GACCTCCTTCAAAATGACCCAAATGCTATTTCGCCTGAACCGTCCGGGTCCGGCCGATCC
GAAACTGATTCTGGAGGGGAGCCTTCTGCTGCGATAGTCAACTCGTCCGCCGGAGGAGCT
TCTTTCACCTCCTCGAAGCGATGGAAGGATATTTTCAAGAAAACTGACAAGAAAGATAGT
AATGAGGAGAGTTGTAGAGAGAAGAAAAAGGACAAGAAGAAAGAGAAAAAACTTGTTGGG
GGAAGCAATGGGGTGACTGGGGCTGAGCTCAATATTAATATTTGGCCCTTTTCGAGGAGT
AGATCCGCCGGAAATGGAGGAAGTAGACCTCGGGTTACGGGTGGATCCGGATTAGCGACC
CGAAAGGTAAGTAGTGCTCCGTGTTCCCGGAGCAACTCCGCCGGTGAATCCAAGTCACGG
AAATGGCCCAGTAGTCCCAGCCGTGGTGGGGTTCATTTGGGCCGGAGCAGCCCAGTTTGG
CAGGTACGACGGAGCTCCGTTAACTCAGGATCCGGTAGCCGGAGCTCCGATAACCTCGTG
AGAACTAATGAAAAATCAATTAGAAAAGAAGCCCCCCAGAAAGAAAGCAGCACCAAAAAG
GTAGTTATTAAAAAAGAAGGCGTTGAAGGCCGCCGGAAATGGTCGTCAGCGGCGGCCGGC
GGTGGGCCTAAAACTAGAGTCTTAAACTTGAATGTCCCTATGTGCATTGGTTACAGGAAT
CAGTTAGGTTGCAGAAGTGATGAAAATAGTGCCATCAATATCGCCGCCACCGCCAACGGA
GGAGTCGTTGGTGATCAGAGTGGTAGCAGCACGGTGACCGGTGAAGGGGTACGTGGCAGT
AACTTATTTAATATCAAAAGCCTATTTACTAAGAAAGTATATTAAGTAATTAAATAGTGG
CAAATCCATAGTAATTACACACTTTTTGAATTATGTTAGTGTATCTATCATTATCCTTTT
CTATATATTCTCCTATGTAACTTTTTCGTAATGTAAAGTCCTAACTTTTGACGTTTGCAA
TGTAATATTTGGACCTCAGTTTGGTCAACTTACTGCATTCTTGCTATTAAAGTTGAA