Microarray Probes on PGSC0003DMT400043054
Probe ID | Chip | Probe Sequence |
---|
CUST_44514_PI426222305 |
JHI_St_60k_v1 |
CCCGGAAAGTGAAGTTCTTAAGAATAGAGTCTCCTCTAGTATCATATTGGCTAATGTTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043054
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043054 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G29930.1 |
+2 |
3e-174 |
488 |
239/268 (89%) |
chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267 |
Transcript Sequence (987 bp)
>PGSC0003DMT400043054 987 pgsc_dm_v3.4
ATCAAATATTATTTGAGTGTAGTAGTAGCAGCATTCAAGAGTATTTCATTTTATTTATAC
AATGGCTGCTTCTACAATGGCTCTATCTTCCCCTTCTTTCGCCGGAAAGGCAGTGAAACT
CTCACCATCTTCTTCTGAAATTACTGGAAATGGAAAAGTCATGATGAGGAAGACTGTTAC
CAAGGCCAAGCCTATCTCTTCTGGTAGCCCATGGTACGGTCCTGATCGTGTCAAGTACTT
GGGCCCATTCTCTGGTGAGTCCCCAAGTTACTTGACTGGTGAATTTCCTGGTGACTATGG
ATGGGACACTGCTGGACTTTCAGCCGATCCAGAAACTTTTGCTAAGAATCGTGAGCTAGA
GGTGATCCACTGTAGATGGGCCATGCTTGGAGCTCTTGGTTGTGTCTTCCCCGAGCTCTT
GGCTCGTAATGGTGTCAAGTTCGGTGAAGCTGTATGGTTCAAAGCTGGATCCCAGATTTT
CAGTGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTT
GGCCATTTGGGCTTGTCAAGTTGTGTTGATGGGAGCTGTAGAGGGTTACCGTATTGCTGG
TGGACCTCTCGGTGAGGTTGTTGACCCACTTTACCCCGGTGGTAGCTTCGACCCATTAGG
TCTTGCTGATGACCCAGAGGCTTTTGCTGAGCTTAAGGTGAAGGAAATCAAGAATGGTAG
ACTTGCTATGTTCTCCATGTTTGGATTCTTTGTTCAAGCTATCGTCACCGGAAAGGGTCC
ATTGGAAAACCTTGCGGACCACCTCGCTGACCCAGTTAACAACAACGCCTGGTCCTACGC
CACAAACTTTGTCCCCGGAAAGTGAAGTTCTTAAGAATAGAGTCTCCTCTAGTATCATAT
TGGCTAATGTTCTTGTAAACTATTGTAAATTATTGGGGATTATATATGAATTTTGATCAA
TTGTGTAGCTCTCAATTATACTTTTTG