Microarray Probes on PGSC0003DMT400042944
Probe ID | Chip | Probe Sequence |
---|
CUST_35876_PI426222305 |
JHI_St_60k_v1 |
ATTCTACTTTTGCTGATTATGGAGGATGGCAAACTGCTCATGCCACTTTCTATGGAGGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042944
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042944 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G40610.1 |
+3 |
3e-108 |
322 |
187/228 (82%) |
expansin A8 | chr2:16949121-16950472 REVERSE LENGTH=253 |
Transcript Sequence (1158 bp)
>PGSC0003DMT400042944 1158 pgsc_dm_v3.4
GTCCATAACCCTTAGCTCATATCAATTCCCACTCATCTCTTATCCTCTCCTTAGTTTTAA
TATACTCAATGGCTTCACTTCCACTTGTTTTCTTCTTTTTAAGCTTTTGCTTCTATTCTA
CTTTTGCTGATTATGGAGGATGGCAAACTGCTCATGCCACTTTCTATGGAGGGGGTGATG
CCTCTGGCACAATGGGGGGGGCTTGTGGATATGGAAATTTGTATAGCCAAGGGTATGGAA
CTAACACTGCAGCACTAAGTACAGCACTATTCAACAATGGTTTAACTTGTGGTGCTTGTT
ATGAGCTCACTTGCAACAATGCAGCTCAATGGTGTCTCCAAGGAACTATTACAGTCACTG
CAACTAATTTTTGTCCTCCGAACCCGTCTCTGCCTAACAATAATGGTGGTTGGTGCAATC
CTCCTCTCCAACATTTTGATTTAGCACAACCTGCTTTCTTGGAAATTGCTAAATACCAAG
CTGGTATCGTCCCTGTATCTTTTCGAAGGGTACCCTGTATGAGAAAAGGAGGAATAAGGT
TTACAGTAAATGGACACTCTTTTTTCAACTTGGTTTTAGTGACAAATGTTGGAGGTGCTG
GTGATATTCAATCAGTTTCAATTAAAGGGTCCAATACTGGATGGCAAGCAATGTCAAGAA
ATTGGGGCCAAAATTGGCAAAGCAATTCTAATCTAAATGGTCAAAGTCTTTCATTTCAAG
TCACTACAAGTGATGGAAGGACACTCATTAGCAACAATGCTGCACCAACTAATTGGCAAT
TTGGACAAACTTTTGAAGGGGCTCAATTTTAATTAATTAATTTACTATAAGCACAAATTG
AGGGGTTTTCAACTTGTAATTTGTATATGGCATGAAAGGGGTGAGTAGGTTTGGGAGAAA
ACTCCCTCATGGTGGGGAGTTTGGCTCTATTGCTGTGGTGGCTGGTTTGCACCCGCTTAG
GCCTATTAGTAATTTTTATTTTTTTTACAATTTTAGGGATATTTGATTAGTGGCCATTTA
TGGATTTGAAGGTCACTTGAATATCACATAGATTTGTCTATTAGTAGTACCTAATTCATT
GTGTAAGCAGAATTAGGGCAACTTCATGTCATCATGTTATCCTTCTTTATAATTGCTTTG
GTACATTTTCTTCTTCCA