Microarray Probes on PGSC0003DMT400042701
Probe ID | Chip | Probe Sequence |
---|
CUST_43211_PI426222305 |
JHI_St_60k_v1 |
TTTAGACGAGGCGGAGTACACAATTGTAAAGAACATCATACAGATTGAATACTACTCTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042701
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042701 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G29500.1 |
+2 |
8e-33 |
117 |
67/122 (55%) |
SAUR-like auxin-responsive protein family | chr1:10321290-10321697 FORWARD LENGTH=135 |
Transcript Sequence (634 bp)
>PGSC0003DMT400042701 634 pgsc_dm_v3.4
GCATTATCAGTTCAACCATCAAAGGTCTCTAAATTTCTTTTCTACTTTTCTCATTTTCAA
TCTTCCAAAAAAACAAATGGCAATGCTCAGCGCTAAGAAACTCATCAAGATGGCCAGGAA
ATGGCAGAAGTTTGCAGCTATGCAGAGGAAGAGGATTTCATCATTTCCAAGAAATGCTAG
TGATGCAGACAGTTGCAGTACGTCTTCATCCTCTATAGTTGAAAAAGGCCGTTTTGTAGT
ATATACAACTGATCAAGCCCATTTTGTCGTTCCCTTGGCTTACCTTGAAAATGAGGTCAT
TAGACAACTTTTAAGCATGTCCGAAGAAGAGTTTGGGTTGCCAAGTGGTGGCCCTATTAC
ATTACCCTGTGATTCAGCCTTGATGAGTTATATCATTTCACTAATCAAGAGAGGTGTAGC
TGCTGGAGATCTTCACAAAGCGTTGCTCTTCTCAATTCCTTCATGTTGCTCTTCAACTTC
TTCTTTGCACCAAGAAAGTGGAAGCCAACAGCTACTTGTTTGTTGAGTCAAGGCCAACAT
TCTTTTTGTAAATGCTAGCTCAAAAATAGTCTTTAGACGAGGCGGAGTACACAATTGTAA
AGAACATCATACAGATTGAATACTACTCTATTTG