Microarray Probes on PGSC0003DMT400042700
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43214_PI426222305 |
JHI_St_60k_v1 |
AAGCCGACAGCTTCTTGTTTATTGAGTCAAGGACAACATAATTTTTGTAGATGCTAGTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042700
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042700 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G29430.1 |
+3 |
4e-35 |
123 |
73/146 (50%) |
SAUR-like auxin-responsive protein family | chr1:10302801-10303226 REVERSE LENGTH=141 |
Transcript Sequence (597 bp)
>PGSC0003DMT400042700 597 pgsc_dm_v3.4
GTTCAACCATAAAAGGTCTCTAAATTTCTTGCTACTTTCTTATTTTCAATCTTCCAAAAA
AACAAATGGCAATGCTCAGCGCTAAGAAACTCATCAAGATGGCTAGGAAATGGCAGAAGT
TTGCCGCTATGCAGAGGAAGAGGATTTCATTTCCAAGAAATGCTAGTGATGTAGACAGTT
GCAGTGCATCTTCATCCTCTATAGTTCAAAAAGGCCATTTTGTAATCTATACAGCTGATC
AAGTCTGCCTCGTCGTTCCATTGGCTTACCTCGAAAATGAGGTCATTAGGCAACTTTTAA
GCATGTCTGAAGAAGAGTTTGGGTTGCCAAGTGGTGGCCCTATTACATTACCCTGTGATT
CAGCCTTCATGAGTTACATTATTTCACTAATCAAGAGAGGTGTAGCTGCTGGAGATCTTC
ACAGAGCAGTGCTCCTCTCGATTCCTTCATGCTGCTGTTCCATTTCTTCTATGCACCAAG
AGAGTGGAAGCCGACAGCTTCTTGTTTATTGAGTCAAGGACAACATAATTTTTGTAGATG
CTAGTTCAAAAATAGTATTCAGAGAAGCAGACATCTAAAAGTACACAATTGTATAGA
