Microarray Probes on PGSC0003DMT400042690
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43185_PI426222305 |
JHI_St_60k_v1 |
AAATAGTTTTTAGATAGGGCATTCACTGAAGAACACACTTGTAAAGCGCATCACACAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042690
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042690 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G29510.1 |
+3 |
7e-37 |
128 |
77/147 (52%) |
SAUR-like auxin-responsive protein family | chr1:10322683-10323114 FORWARD LENGTH=143 |
Transcript Sequence (609 bp)
>PGSC0003DMT400042690 609 pgsc_dm_v3.4
CATCCATAAAAAATCTCTAAATTTCTTATTTACTCTCTTGTTTCCAATCTTCCGGTATTT
TTTTAACAATGATCAGTACCAAGAAACTCATCAAAATGGCCAGGAGATGGCAGAAGTTCG
CAGCCGGGCAGAGGAAGAGGATTTCATTTTCAAGAAATGTTAGTGATGTAGATGATTGCA
GTACGTCTTCATCGTCTATAGTTGAAAAAGGGCATTTCGTAGTATATACAATTGATCAAA
AGCGCTTCGTGATTCCCTTGGTTTATCTTGAAAATGAGGTCATTAGGCAGCATTTGATCA
TATCTGAAGAAGAGTTTGGTCTGTCAAGTGATGGCCCTATTACATTACCTTGTTATTCAA
CCTTCATGGACTACATCATTTCGCTAATAAGGAAAGGCGTAACTGCAGGAGATCTTCACA
AAGCATTGCTCCTATCAATTCCTTCATGTTGCTGTTCGACTTCTTTTTTGTTCCAAGAAA
GTGGAAACCAACAGCTTCTTGTTTGTTGAGTCATAATCAACATTATATTTATTACATTCT
AGCTCAAAATAGTTTTTAGATAGGGCATTCACTGAAGAACACACTTGTAAAGCGCATCAC
ACAGATTGA
