Microarray Probes on PGSC0003DMT400042621
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31557_PI426222305 |
JHI_St_60k_v1 |
GATACTGGTAGCTGCTTTGCTGTAACAAGAAATATTGGTAGTATTGTAGTACACAATTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042621
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042621 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79820.1 |
+1 |
0.0 |
626 |
326/477 (68%) |
Major facilitator superfamily protein | chr1:30022581-30026771 REVERSE LENGTH=495 |
Transcript Sequence (2389 bp)
>PGSC0003DMT400042621 2389 pgsc_dm_v3.4
GAAAAAAAAAGAAAACGAAAAAGCAACAGCATTGGAGCAGGTGTACCGTCTCAGAGCTCT
CGTAGTTTTTAGATGCTTTCGTGTCGTCATTCTCCTTCCTTCCATGGAACCACTGCATAT
GCACTTGTTTGTTTGCTTACAAGTGAAAACACGTTAGCACCTTTTCTAAGATTTCTCTCC
GTCCCTTTTGCATTAACACGTTTTCCTTTTCACTTTTTCTTAATTAATTCCTTCTAAAAC
TTCACTACCAATATGCAATAGCTAGCCACTCCATTTTCTGCCTCACAAAACGTTTTTTTT
CAGGAGATCTGGGATTTGGGCAGGTTGGCGTATATGATTGGGATTTTTCTTACATTACCA
TAAAACAGATCACACAATATGAGAGGTGGTGGTCTTGCAGATGCTTACTCCATGTACAAG
CGCGCATCAACTAAAGACCAGTTCACTGATTATGAAGATAGAGAAGAAAATCTAGATCGT
ACCGAAAATGGTGTGTGGAAAGAAATTGGAAACCCCTCATGGAAGCGGCCGTTGCCACAT
ATACTGGTGGCAATTATTTCATCACTCTTGTTTGGCTACCATCTTGGGGTGGTTAATGAC
ACTCTAGAAAGCATGTCTTTGGACCTTGACTTCAGTGGCAGCACCTTGGCTGAAGGTCTA
GTTGTGAGTACATGTTTGGGAGGTGCTCTTTTGGGCTCTATATTCAGTGGTTGGATAGCA
GATGGGGTTGGTCGTCGGAGAGGCTTTCAACTGTGTGCTCTACCAATGATAATAGGTGCT
TCTATGAGTGCTGCAACCAGTACTCTTGGAGTTATGCTTCTTGGAAGGTTATTTGTTGGA
ATAGGGATGGGCCTTGGCCCTGCTGTTGCTGCTCTCTATGTTGCAGAGGTTTCACCAGCT
TTTGTTAGAGGCACTTATGGGAGTTTCACTCAGATCGCCACATGCCTTGGGCTCCTGGGA
TCTCTTCTTATTGGAATTCCTGCCAAGGATACTGCTGGTTGGTGGCGAGTTTGCTTTTGG
ATATCCACCATTCCTGCTGCATTACTTGCTGTTTTGATGGAATTCTGCGCTGAGAGTCCT
CACTGGCTTGTTAAGAGAGGAAGAATTGATTTAGCTGAAGAAGAGCTTGAAAAGCTTATG
GGAGCATCACATGTTAAATATGCCATTGCAGAAATGTCAAAGACAGACAAAGGAGATGAG
GTGGATAATGTTAGGTTTGGAGAGCTACTGTATGGTCGTCATTTTAAAGTGGTTTACATT
GGATCTGCCTTATTTGCTTTGCAACAACTATCTGGAATAAATGCTGTATTTTATTTCTCT
TCAACTGTTTTTAAAAAGGCTGGAGTACCTACAGACACTGCAAATACATGCGTTGGGATT
GTAAACTTAACAGGGTCTATTATTGCAATGATGTTGATGGATAGGCTTGGGAGGAAGGTG
CTTCTAATTGGGAGTTTCTTGGGCATGGCAGTCGCAACGGGTCTTCAAGTAGCAGCTGCG
AGTTCATTTGTACCAAGCTTTGCAGTTTTATACCTATCAGTTGGCGGGACCCTACTGTAT
GTGTTGGCATTTTCTTTGGGTGCTGGTCCAGTCCCCAGCCTCCTGCTGTCAGAGATATTT
CCTGGCCGGATTAGGGCAAAGGCAATGGCTTTATGCATGGCTGCACATTGGGTCATAAAT
TTTTTAGTCGGCCTTCTGTTTCTGCCGATGCTTGAGCATCTTGGACCACAAATAGTGTAT
GCGGTCTTTGCAGGTTTTTGCTTGTTTGCAGTGGCCTTTGTGAAAAAGAATGTGGTGGAA
ACAAAAGGAAAAACATTACAGGAGATTGAGTTTGCCCTTCTTCCGTCTCATTAGTTGGTG
ACTAGATCACACTCTATATTAAGTTCAGATTGGAAAATGTTAAGGTCCTAGAGATTGAAC
ATCCAAATTCTTTGCTATAGCTATTTCTTGATTTGTACAATTTTGGAGTGTGTTCATAGG
CAGGAAAGGCAGCAATGACGAACAATCAAGATAAAGATTGTCACAAAGCTAGTTTTCATA
GGGCAATTGTCACTCTGCTTATTTTTGCTGCTTTTCTGCTCACTCCACTGGTCGGTGACT
ATTGCCTGAGGGAGCATGAAACTGCATCTGCCTCGGCCAGCAGTAGATCACATATATACT
ACAGAGTACCTATTGTTGTTATTTTTGTATACCCTTTCTTTTAATTTTTACCTTGATCTG
ATTTTTGTAACTAGCATGGCACAGAAAGGCTACTCTGAACATTCCTTACAGAAATAATGT
TACAGATTTTGAATTAGAAAGATACTGGTAGCTGCTTTGCTGTAACAAGAAATATTGGTA
GTATTGTAGTACACAATTGATTAATGTAGCTGAGATTTTTTCATATTTG
