Microarray Probes on PGSC0003DMT400042620
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31440_PI426222305 |
JHI_St_60k_v1 |
GATACTGGTAGCTGCTTTGCTGTAACAAGAAATATTGGTAGTATTGTAGTACACAATTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042620
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042620 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79820.1 |
+1 |
8e-174 |
380 |
191/283 (67%) |
Major facilitator superfamily protein | chr1:30022581-30026771 REVERSE LENGTH=495 |
Transcript Sequence (2368 bp)
>PGSC0003DMT400042620 2368 pgsc_dm_v3.4
GAAAAAAAAAGAAAACGAAAAAGCAACAGCATTGGAGCAGGTGTACCGTCTCAGAGCTCT
CGTAGTTTTTAGATGCTTTCGTGTCGTCATTCTCCTTCCTTCCATGGAACCACTGCATAT
GCACTTGTTTGTTTGCTTACAAGTGAAAACACGTTAGCACCTTTTCTAAGATTTCTCTCC
GTCCCTTTTGCATTAACACGTTTTCCTTTTCACTTTTTCTTAATTAATTCCTTCTAAAAC
TTCACTACCAATATGCAATAGCTAGCCACTCCATTTTCTGCCTCACAAAACGTTTTTTTT
CAGGAGGTTGGCGTATATGATTGGGATTTTTCTTACATTACCATAAAACAGATCACACAA
TATGAGAGGTGGTGGTCTTGCAGATGCTTACTCCATGTACAAGCGCGCATCAACTAAAGA
CCAGTTCACTGATTATGAAGATAGAGAAGAAAATCTAGATCGTACCGAAAATGGTGTGTG
GAAAGAAATTGGAAACCCCTCATGGAAGCGGCCGTTGCCACATATACTGGTGGCAATTAT
TTCATCACTCTTGTTTGGCTACCATCTTGGGGTGGTTAATGACACTCTAGAAAGCATGTC
TTTGGACCTTGACTTCAGTGGCAGCACCTTGGCTGAAGGTCTAGTTGTGAGTACATGTTT
GGGAGGTGCTCTTTTGGGCTCTATATTCAGTGGTTGGATAGCAGATGGGGTTGGTCGTCG
GAGAGGCTTTCAACTGTGTGCTCTACCAATGATAATAGGTGCTTCTATGAGTGCTGCAAC
CAGTACTCTTGGAGTTATGCTTCTTGGAAGGTTATTTGTTGGAATAGGGATGGGCCTTGG
CCCTGCTGTTGCTGCTCTCTATGTTGCAGAGGTTTCACCAGCTTTTGTTAGAGGCACTTA
TGGGAGTTTCACTCAGATCGCCACATGCCTTGGGCTCCTGGGATCTCTTCTTATTGGAAT
TCCTGCCAAGGATACTGCTGGTGGCGAGTTTGCTTTTGGATATCCACCATTCCTGCTGCA
TTACTTGCTGTTTTGATGGAATTCTGCGCTGAGAGTCCTCACTGGCTTGTTAAGAGAGGA
AGAATTGATTTAGCTGAAGAAGAGCTTGAAAAGCTTATGGGAGCATCACATGTTAAATAT
GCCATTGCAGAAATGTCAAAGACAGACAAAGGAGATGAGGTGGATAATGTTAGGTTTGGA
GAGCTACTGTATGGTCGTCATTTTAAAGTGGTTTACATTGGATCTGCCTTATTTGCTTTG
CAACAACTATCTGGAATAAATGCTGTATTTTATTTCTCTTCAACTGTTTTTAAAAAGGCT
GGAGTACCTACAGACACTGCAAATACATGCGTTGGGATTGTAAACTTAACAGGGTCTATT
ATTGCAATGATGTTGATGGATAGGCTTGGGAGGAAGGTGCTTCTAATTGGGAGTTTCTTG
GGCATGGCAGTCGCAACGGGTCTTCAAGTAGCAGCTGCGAGTTCATTTGTACCAAGCTTT
GCAGTTTTATACCTATCAGTTGGCGGGACCCTACTGTATGTGTTGGCATTTTCTTTGGGT
GCTGGTCCAGTCCCCAGCCTCCTGCTGTCAGAGATATTTCCTGGCCGGATTAGGGCAAAG
GCAATGGCTTTATGCATGGCTGCACATTGGGTCATAAATTTTTTAGTCGGCCTTCTGTTT
CTGCCGATGCTTGAGCATCTTGGACCACAAATAGTGTATGCGGTCTTTGCAGGTTTTTGC
TTGTTTGCAGTGGCCTTTGTGAAAAAGAATGTGGTGGAAACAAAAGGAAAAACATTACAG
GAGATTGAGTTTGCCCTTCTTCCGTCTCATTAGTTGGTGACTAGATCACACTCTATATTA
AGTTCAGATTGGAAAATGTTAAGGTCCTAGAGATTGAACATCCAAATTCTTTGCTATAGC
TATTTCTTGATTTGTACAATTTTGGAGTGTGTTCATAGGCAGGAAAGGCAGCAATGACGA
ACAATCAAGATAAAGATTGTCACAAAGCTAGTTTTCATAGGGCAATTGTCACTCTGCTTA
TTTTTGCTGCTTTTCTGCTCACTCCACTGGTCGGTGACTATTGCCTGAGGGAGCATGAAA
CTGCATCTGCCTCGGCCAGCAGTAGATCACATATATACTACAGAGTACCTATTGTTGTTA
TTTTTGTATACCCTTTCTTTTAATTTTTACCTTGATCTGATTTTTGTAACTAGCATGGCA
CAGAAAGGCTACTCTGAACATTCCTTACAGAAATAATGTTACAGATTTTGAATTAGAAAG
ATACTGGTAGCTGCTTTGCTGTAACAAGAAATATTGGTAGTATTGTAGTACACAATTGAT
TAATGTAGCTGAGATTTTTTCATATTTG
