Microarray Probes on PGSC0003DMT400042582
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31465_PI426222305 |
JHI_St_60k_v1 |
GATGCCAAAGATCATAATGGGGTACAAGTTGGATAAATTCACTAGTGATACTTACATTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042582
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042582 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G80340.1 |
+1 |
6e-129 |
380 |
194/355 (55%) |
gibberellin 3-oxidase 2 | chr1:30200695-30202163 REVERSE LENGTH=347 |
Transcript Sequence (1287 bp)
>PGSC0003DMT400042582 1287 pgsc_dm_v3.4
ATCTACATTTTTTTTTATAAATTTTTCATTACGTACTACTACACTATGCCTTCAAGAATC
TCAGATTCTTTTAGACCTCATCACTCTCAAAAACACTTTGACTTGAATTCAATTAAAGAA
TTACCAGAATCCCATGCATGGACATCATCAAATGATCATTATACTCAAGAAAATTCATGT
AATTTCGAGTCTATTCCGGTTATCGACCTCGATAACAACAACAACAACAATAATAATATT
CTTGATCATATAGGTCATGCATGCAAGAAATGGGGTGCATTTCAAATTATAAACCATAGT
ATATCAGAGAGGTTACTACAAGATATTGATGTGGCCGGGAAAACCCTTTTTTCACTTCCT
ATGCAACAAAAATTGAAGGCTGCTCGCTCTCCTGATGGTGTCACTGGCTATGGCGTGGCT
CGAATTTCGTCTTTTTTCTCAAAGCTCATGTGGTCTGAAGGGTTCACCATTGTTGGCTCC
CCAATTGAACATGCTCGACAACTTTGGCCTAAAGATTACAAGAAATTCTGTGAAGTAATA
GAAGAATATGAAAAGGAAATGGAAAAGCTAGCAGGAAGATTAATGTGGCTTATACTTGGG
TCATTAGGAATAACAAAAGATGATGTAAAATGGGCCGTAGGCCCAAAAGGTGAAACCAAA
GAAGGATGTGCTGCCTTACAACTAAATTCATACCCGGCATGTCCCGATCCGGGTCGGGCC
ATGGGTCTTGCAGCACATACGGATTCTACCATATTAACAATCCTTCACCAAAACAACACA
AGTGGTTTACAAGTTTACCAAGAGGGAAATGGGTGGGTCACTGTCCCTCCAATACCCGGG
GCATTAGTAGTTAATGTAGGTGACTTATTACACATACTCTCAAACGGGTCATACCCGAGT
GTTTTACATCGGGCGGTTGTGAACCGGACACGACATCGACTTTCTGTAGCCTATTTATAT
GGTCCACCGACAGGGGTGAGAGTCTCACCCCTGTCGAAATTGCTGGACCATAGGCACCCA
CCCTTGTATAGGGCAGTGACATGGAGTGAGTATTTGGGCACTAAGGCCAAATATTTTGAT
AAGGCACTTTCATCTGTACGGCTTTGTGTCCCTTTGAGTGGATTTGCTGATGCCAAAGAT
CATAATGGGGTACAAGTTGGATAAATTCACTAGTGATACTTACATTTGAATTTTATTTTT
AAAAAAATTATGTTTCTTTTTCTCTCTTGATGTTCCTTTTTACTCCATTATTGGAGGAAT
ATTGTTAATATTTTTGGGAGAGAGGAG
