Microarray Probes on PGSC0003DMT400042495
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18510_PI426222305 |
JHI_St_60k_v1 |
AGTCTCTGGGATTTTGTTTGGGAGGTTTATAGGAGTATATGCTTTTGTATTCGGTATATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042495
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042495 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G04630.1 |
+2 |
2e-28 |
109 |
65/160 (41%) |
Protein of unknown function, DUF584 | chr4:2332163-2332669 REVERSE LENGTH=168 |
Transcript Sequence (875 bp)
>PGSC0003DMT400042495 875 pgsc_dm_v3.4
ATGAAACAAAAAACAAACATCCCTTTCTCTTAGCTATATATAGTTGTTAGGCTTCCCCTT
TCTAGATGTCAAGCTTTTTAGTACTTCACCAGAAATAAAAAAAGTCCCAAACTTTTTCAT
TGTTGAGAGATCTAATTAGAACCAAAGAATGGAAGAGTTTAATAGCAACAGAAACAAAGG
AAAAACAGAGAAAGATGGAGACTTTGAAGAAGAAGATGTATGGGGTTATGTGAATGAAAG
AGATTCATCAAGAGTGAATATCCCAAGAGGAAAAAGTAACAAGTGTATGTTACATAAATC
ATCAAGTCCTGTTGAGATTCCAGAATGGTCCAAGAATAGCAATAAACAGAAATCAAGAAG
AGTTAGAACAGAGGATGGTTCTTCTTTCTCATCAGTTGCTTATTCTGGAAATGTCGAAGA
AGAAGAAGAAGAAGAAGAAGATGATTATGGTGATGGAATAGTGCCACCACATGAATATAT
AGCAAGAAGAGTAGCAAGAAATCAAATAGCTTCATTTTCAATGGTGGAAGGAGTTGGAAG
GACTCTTAAGGGAAGGGACCTTAGCAAATTAAGGAATGCCATTTTAACTAAGACAGGTTT
CTTGGAATAGCTAGCTACCTAATACTATTATCAACTAACAAAATTAGACCATCCATCTTC
ATCAATCATCACATGTTATTATCATTTTTTGGTATCATTAGATTACTACTCGTTATGTTT
AAGTATGGCCTTCTTATTTTTAGCAGAGATGCAATTTTCGGATTATTTTTTTTTATTGGA
GGAAAAAGTAAGGCAGTCTCTGGGATTTTGTTTGGGAGGTTTATAGGAGTATATGCTTTT
GTATTCGGTATATGATATATGAAAGACTCATTTTT
